RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA293022" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA293022 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30548090 30548090 PRJNA293022_P_NODE_44253_length_210_cov_0.850932_g43516_i0 PRJNA293022 44253 210 0.850932 1.7869572 Orbicella faveolata 48498 Cnidaria other_Eukaryota 54.3 1.9e-6   NR XP_020609478.1 48498 g43516 i0 49 1.48571428571429 51 26 72.9 0 160 8 207 257 XP_020609478.1 uncharacterized protein LOC110048052 isoform X1 [Orbicella faveolata] diamond 312 54.3 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Merulinidae Orbicella Orbicella faveolata
31134153 31134153 PRJNA293022_P_NODE_23695_length_291_cov_1.115702_g22958_i0 PRJNA293022 23695 291 1.115702 3.24669282 Metazoa 33208 Cnidaria other_Eukaryota 96.3 1.78e-22   NR KAF1741123.1 59785 g22958 i0 66.2 12.7731958762887 74 25 76.3 0 285 64 40 113 KAF1741123.1 hypothetical protein MXB_1517 [Myxobolus squamalis] diamond 3717 97.1 0.991761071060762 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxobolidae Myxobolus Myxobolus squamalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;