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contig_metadata

31 rows where analysis = "diamond", bioproject = "PRJNA293022" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 31 ✖

tax_clade 1

bioproject 1

  • PRJNA293022 · 31 ✖

analysis 1

  • diamond · 31 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
373408 373408 PRJNA293022_P_NODE_72501_length_166_cov_0.888889_g71764_i0 PRJNA293022 72501 166 0.888889 1.47555574 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 79.7 1.1e-15   NR KRX07809.1 266149 g71764 i0 72.3 2.69277108433735 47 13 84.9 0 147 7 232 278 KRX07809.1 Protein kinase-like domain [Pseudocohnilembus persalinus] diamond 447 79.7 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
22049699 22049699 PRJNA293022_P_NODE_36598_length_231_cov_1.340659_g35861_i0 PRJNA293022 36598 231 1.340659 3.09692229 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 110 4.24e-29   NR KRX09557.1 266149 g35861 i0 70.3 3.84415584415584 74 22 96.1 0 225 4 24 97 KRX09557.1 Ribosomal protein S5 domain 2-type fold [Pseudocohnilembus persalinus] diamond 888 111 0.990990990990991 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
24599535 24599535 PRJNA293022_P_NODE_73340_length_165_cov_1.775862_g72603_i0 PRJNA293022 73340 165 1.775862 2.9301723 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 95.1 4.69e-21   NR AAP51165.1 36767 g72603 i0 84.6 30.2909090909091 52 8 94.5 0 156 1 316 367 AAP51165.1 heat-shock protein 70 [Euplotes focardii] diamond 4998 95.1 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Euplotes Euplotes focardii
26662354 26662354 PRJNA293022_P_NODE_37281_length_229_cov_0.855556_g36544_i0 PRJNA293022 37281 229 0.855556 1.95922324 Ichthyophthirius multifiliis 5932 SAR_Eukaryotes SAR_Eukaryotes 92 2.66e-20   NR XP_004037235.1 5932 g36544 i0 59.4 0.903930131004367 69 28 90.4 0 208 2 119 187 XP_004037235.1 protein phosphatase 2c, putative [Ichthyophthirius multifiliis] diamond 207 92 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
26725611 26725611 PRJNA293022_P_NODE_77201_length_163_cov_0.912281_g76464_i0 PRJNA293022 77201 163 0.912281 1.48701803 Stentor coeruleus 5963 SAR_Eukaryotes SAR_Eukaryotes 77.4 7.62e-15   NR OMJ82799.1 5963 g76464 i0 68.6 4.69325153374233 51 16 93.9 0 160 8 52 102 OMJ82799.1 hypothetical protein SteCoe_16396 [Stentor coeruleus] diamond 765 77.4 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Stentoridae Stentor Stentor coeruleus
26979228 26979228 PRJNA293022_P_NODE_59582_length_180_cov_1.572519_g58845_i0 PRJNA293022 59582 180 1.572519 2.8305341999999998 Cryptocaryon irritans 153251 SAR_Eukaryotes SAR_Eukaryotes 73.9 6.94e-14   NR ARK36663.1 153251 g58845 i0 78.6 2.1 42 9 70 0 54 179 13 54 ARK36663.1 NADH dehydrogenase subunit 1 [Cryptocaryon irritans] diamond 378 73.9 1 Eukaryota Sar   Ciliophora       Cryptocaryon Cryptocaryon irritans
26996742 26996742 PRJNA293022_P_NODE_64902_length_172_cov_1.650407_g64165_i0 PRJNA293022 64902 172 1.650407 2.83870004 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 72 6.63e-13   NR XP_001024171.1 312017 g64165 i0 62.5 2.82558139534884 56 21 97.7 0 169 2 155 210 XP_001024171.1 elongation factor Tu GTP-binding domain protein [Tetrahymena thermophila SB210] diamond 486 72 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
27105629 27105629 PRJNA293022_P_NODE_74542_length_165_cov_0.896552_g73805_i0 PRJNA293022 74542 165 0.896552 1.4793108 Ichthyophthirius multifiliis 5932 SAR_Eukaryotes SAR_Eukaryotes 77.4 7.76e-15   NR XP_004039553.1 5932 g73805 i0 64.8 1.96363636363636 54 19 98.2 0 4 165 308 361 XP_004039553.1 protein phosphatase 2A regulatory B subunit, B56 family, putative [Ichthyophthirius multifiliis] diamond 324 77.4 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
27358845 27358845 PRJNA293022_P_NODE_71263_length_167_cov_0.881356_g70526_i0 PRJNA293022 71263 167 0.881356 1.47186452 Paramecium tetraurelia 5888 SAR_Eukaryotes SAR_Eukaryotes 86.7 4.46e-18   NR XP_001457977.1 5888 g70526 i0 77.4 1.90419161676647 53 12 95.2 0 7 165 315 367 XP_001457977.1 uncharacterized protein GSPATT00003441001 [Paramecium tetraurelia] diamond 318 86.7 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium tetraurelia
27485017 27485017 PRJNA293022_P_NODE_31423_length_250_cov_1.024876_g30686_i0 PRJNA293022 31423 250 1.024876 2.56219 Paramecium primaurelia 5886 SAR_Eukaryotes SAR_Eukaryotes 84 1.21e-16   NR CAD8048075.1 5886 g30686 i0 49.4 0.924 77 38 91.2 1 248 21 329 405 CAD8048075.1 unnamed protein product [Paramecium primaurelia] diamond 231 84 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium primaurelia
27611405 27611405 PRJNA293022_P_NODE_45964_length_206_cov_0.987261_g45227_i0 PRJNA293022 45964 206 0.987261 2.03375766 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 90.9 1.92e-21   NR KRX10691.1 266149 g45227 i0 68.2 2.85436893203884 66 21 96.1 0 198 1 1 66 KRX10691.1 Translation protein SH3-like domain [Pseudocohnilembus persalinus] diamond 588 90.9 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
27674641 27674641 PRJNA293022_P_NODE_41784_length_216_cov_1.233533_g41047_i0 PRJNA293022 41784 216 1.233533 2.66443128 Paramecium sonneborni 65129 SAR_Eukaryotes SAR_Eukaryotes 50.4 4.81e-5   NR CAD8084070.1 65129 g41047 i0 43.9 0.791666666666667 57 31 77.8 1 213 46 226 282 CAD8084070.1 unnamed protein product [Paramecium sonneborni] diamond 171 50.4 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium sonneborni
27832250 27832250 PRJNA293022_P_NODE_75364_length_164_cov_0.904348_g74627_i0 PRJNA293022 75364 164 0.904348 1.48313072 Tetrahymena malaccensis 5901 SAR_Eukaryotes SAR_Eukaryotes 68.2 1.36e-11   NR KAL4460894.1 5901 g74627 i0 55.6 3.95121951219512 54 24 98.8 0 3 164 368 421 KAL4460894.1 hypothetical protein ABPG74_016366 [Tetrahymena malaccensis] diamond 648 68.2 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena malaccensis
28386608 28386608 PRJNA293022_P_NODE_65066_length_172_cov_1.252033_g64329_i0 PRJNA293022 65066 172 1.252033 2.15349676 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 68.6 3.6e-12   NR AAW02920.1 5908 g64329 i0 57.1 1.95348837209302 56 24 97.7 0 4 171 151 206 AAW02920.1 translation elongation factor 1B alpha subunit, partial [Tetrahymena pyriformis] diamond 336 68.6 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
28463931 28463931 PRJNA293022_P_NODE_70786_length_167_cov_0.881356_g70049_i0 PRJNA293022 70786 167 0.881356 1.47186452 Paramecium bursaria 74790 SAR_Eukaryotes SAR_Eukaryotes 46.2 8e-4   NR QZA51941.1 74790 g70049 i0 41.5 0.952095808383233 53 28 95.2 1 161 3 518 567 QZA51941.1 piwi c2 [Paramecium bursaria] diamond 159 46.2 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium bursaria
28747960 28747960 PRJNA293022_P_NODE_76887_length_163_cov_1.350877_g76150_i0 PRJNA293022 76887 163 1.350877 2.20192951 Blepharisma stoltei 1481888 SAR_Eukaryotes SAR_Eukaryotes 58.5 3.21e-8   NR CAG9333234.1 1481888 g76150 i0 53.1 3.66257668711656 49 23 90.2 0 149 3 321 369 CAG9333234.1 unnamed protein product [Blepharisma stoltei] diamond 597 58.5 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Blepharismidae Blepharisma Blepharisma stoltei
28905604 28905604 PRJNA293022_P_NODE_71028_length_167_cov_0.881356_g70291_i0 PRJNA293022 71028 167 0.881356 1.47186452 Stylonychia lemnae 5949 SAR_Eukaryotes SAR_Eukaryotes 62 2.12e-9   NR CDW80998.1 5949 g70291 i0 52.1 0.862275449101796 48 23 86.2 0 13 156 452 499 CDW80998.1 low quality protein: importin-5-like [Stylonychia lemnae] diamond 144 62 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
29473871 29473871 PRJNA293022_P_NODE_62570_length_175_cov_2.650794_g61833_i0 PRJNA293022 62570 175 2.650794 4.6388895 Ichthyophthirius multifiliis 5932 SAR_Eukaryotes SAR_Eukaryotes 72.8 9.78e-15   NR XP_004030095.1 5932 g61833 i0 64.7 0.874285714285714 51 18 87.4 0 169 17 9 59 XP_004030095.1 hypothetical protein IMG5_167680 [Ichthyophthirius multifiliis] diamond 153 72.8 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
29523351 29523351 PRJNA293022_P_NODE_77930_length_163_cov_0.868421_g77193_i0 PRJNA293022 77930 163 0.868421 1.41552623 Ciliophora 5878 SAR_Eukaryotes SAR_Eukaryotes 86.7 4.28e-18   NR OMJ78400.1 5963 g77193 i0 73.6 3.88343558282209 53 14 97.5 0 160 2 249 301 OMJ78400.1 hypothetical protein SteCoe_21773 [Stentor coeruleus] diamond 633 87.4 0.991990846681922 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Stentoridae Stentor Stentor coeruleus
29916402 29916402 PRJNA293022_P_NODE_70591_length_167_cov_0.881356_g69854_i0 PRJNA293022 70591 167 0.881356 1.47186452 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 77.4 7.95e-15   NR P36422.1 5911 g69854 i0 63.5 1.83233532934132 52 19 93.4 0 11 166 5 56 P36422.1 RecName: Full=Isoleucine--tRNA ligase; AltName: Full=Isoleucyl-tRNA synthetase; Short=IleRS [Tetrahymena thermophila] diamond 306 77.4 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
29979402 29979402 PRJNA293022_P_NODE_74431_length_165_cov_0.896552_g73694_i0 PRJNA293022 74431 165 0.896552 1.4793108 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 50.8 1.76e-5   NR KRX04237.1 266149 g73694 i0 43.8 1.74545454545455 48 27 87.3 0 161 18 172 219 KRX04237.1 hypothetical protein PPERSA_11361 [Pseudocohnilembus persalinus] diamond 288 50.8 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
30105670 30105670 PRJNA293022_P_NODE_42232_length_215_cov_0.933735_g41495_i0 PRJNA293022 42232 215 0.933735 2.00753025 Stylonychia lemnae 5949 SAR_Eukaryotes SAR_Eukaryotes 93.2 3.97e-20   NR CDW73283.1 5949 g41495 i0 60.6 0.990697674418605 71 27 97.7 1 3 212 106 176 CDW73283.1 UNKNOWN [Stylonychia lemnae] diamond 213 93.2 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
30390583 30390583 PRJNA293022_P_NODE_65553_length_171_cov_1.688525_g64816_i0 PRJNA293022 65553 171 1.688525 2.88737775 Tetrahymena thermophila SB21 5911 SAR_Eukaryotes SAR_Eukaryotes 57 1.18e-7   NR XP_001027842.2 312017 g64816 i0 48.1 2.84210526315789 54 28 94.7 0 9 170 256 309 XP_001027842.2 cytochrome protein c1 [Tetrahymena thermophila SB210] diamond 486 57 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
30927458 30927458 PRJNA293022_P_NODE_61494_length_177_cov_1.609375_g60757_i0 PRJNA293022 61494 177 1.609375 2.84859375 Blepharisma stoltei 1481888 SAR_Eukaryotes SAR_Eukaryotes 77 1.3e-16   NR CAG9313734.1 1481888 g60757 i0 74.1 0.915254237288136 54 14 91.5 0 174 13 2 55 CAG9313734.1 unnamed protein product [Blepharisma stoltei] diamond 162 77 1 Eukaryota Sar   Ciliophora Heterotrichea Heterotrichida Blepharismidae Blepharisma Blepharisma stoltei
31085275 31085275 PRJNA293022_P_NODE_22715_length_298_cov_1.128514_g21978_i0 PRJNA293022 22715 298 1.128514 3.36297172 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 57.8 3.46e-7   NR KRX06560.1 266149 g21978 i0 34.7 0.986577181208054 98 64 98.7 0 295 2 180 277 KRX06560.1 hypothetical protein PPERSA_10418 [Pseudocohnilembus persalinus] diamond 294 57.8 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
31338071 31338071 PRJNA293022_P_NODE_68536_length_168_cov_1.731092_g67799_i0 PRJNA293022 68536 168 1.731092 2.90823456 Tetrahymena thermophila SB21 5911 SAR_Eukaryotes SAR_Eukaryotes 63.2 6.71e-10   NR XP_001011682.1 312017 g67799 i0 55.1 1.73214285714286 49 22 87.5 0 21 167 84 132 XP_001011682.1 ribosome biogenesis regulatory protein (RRS1) [Tetrahymena thermophila SB210] diamond 291 63.2 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
31685953 31685953 PRJNA293022_P_NODE_70877_length_167_cov_0.881356_g70140_i0 PRJNA293022 70877 167 0.881356 1.47186452 Tetrahymena utriculariae 2486642 SAR_Eukaryotes SAR_Eukaryotes 52 5.16e-6   NR KAL4475745.1 2486642 g70140 i0 50 0.934131736526946 52 26 93.4 0 4 159 61 112 KAL4475745.1 hypothetical protein ABPG72_011522 [Tetrahymena utriculariae] diamond 156 52 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena utriculariae
31717706 31717706 PRJNA293022_P_NODE_57097_length_184_cov_1.881481_g56360_i0 PRJNA293022 57097 184 1.881481 3.46192504 Sorogena stoianovitchae 164621 SAR_Eukaryotes SAR_Eukaryotes 56.6 4.92e-8   NR BAG12793.1 164621 g56360 i0 42.6 0.994565217391304 61 35 99.5 0 2 184 65 125 BAG12793.1 putative ribosomal protein P0, partial [Sorogena stoianovitchae] diamond 183 56.6 1 Eukaryota Sar   Ciliophora Colpodea Sorogenida Sorogenidae Sorogena Sorogena stoianovitchae
31893452 31893452 PRJNA293022_P_NODE_25097_length_282_cov_1.321888_g24360_i0 PRJNA293022 25097 282 1.321888 3.72772416 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 132 1.18e-33   NR CDW77953.1 5949 g24360 i0 68.5 7.80851063829787 92 29 97.9 0 278 3 527 618 CDW77953.1 60s ribosomal protein l15 [Stylonychia lemnae] diamond 2202 133 0.992481203007519 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
32382168 32382168 PRJNA293022_P_NODE_64159_length_173_cov_1.645161_g63422_i0 PRJNA293022 64159 173 1.645161 2.84612853 Paramecium tetraurelia 5888 SAR_Eukaryotes SAR_Eukaryotes 58.9 2.81e-8   NR XP_001430983.1 5888 g63422 i0 58.7 3.17341040462428 46 19 79.8 0 170 33 6 51 XP_001430983.1 uncharacterized protein GSPATT00033438001 [Paramecium tetraurelia] diamond 549 58.9 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium tetraurelia
32494851 32494851 PRJNA293022_P_NODE_28879_length_262_cov_0.971831_g28142_i0 PRJNA293022 28879 262 0.971831 2.54619722 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 114 5.31e-30   NR CAD8043291.1 5886 g28142 i0 59.8 3.98473282442748 87 35 99.6 0 261 1 25 111 CAD8043291.1 unnamed protein product [Paramecium primaurelia] diamond 1044 115 0.991304347826087 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium primaurelia

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;