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contig_metadata

28 rows where analysis = "diamond", bioproject = "PRJNA293022" and tax_phylum = "Chordata"

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tax_superkingdom 1

tax_phylum 1

  • Chordata · 28 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA293022 · 28 ✖

analysis 1

  • diamond · 28 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26599043 26599043 PRJNA293022_P_NODE_1_length_9527_cov_9212.645495_g0_i0 PRJNA293022 1 9527 9212.645495 877688.73630865 Carcharodon carcharias 13397 Chordata Chordata 1097 0   NR XP_041058168.1 13397 g0 i0 66.2 0.240579405899024 764 254 24.1 2 3179 5470 2 761 XP_041058168.1 uncharacterized protein LOC121285616 [Carcharodon carcharias] diamond 2292 1097 1 Eukaryota Opisthokonta Metazoa Chordata Chondrichthyes Lamniformes Alopiidae Carcharodon Carcharodon carcharias
27060207 27060207 PRJNA293022_P_NODE_71122_length_167_cov_0.881356_g70385_i0 PRJNA293022 71122 167 0.881356 1.47186452 Opisthokonta 33154 Chordata Chordata 82.8 9.76e-17   NR NP_001006536.1 9031 g70385 i0 65.5 6.89820359281437 55 19 98.8 0 3 167 192 246 NP_001006536.1 cell division cycle protein 20 homolog [Gallus gallus] diamond 1152 83.6 0.990430622009569 Eukaryota Opisthokonta Metazoa Chordata Aves Galliformes Phasianidae Gallus Gallus gallus
27105619 27105619 PRJNA293022_P_NODE_2_length_9439_cov_9252.072204_g0_i1 PRJNA293022 2 9439 9252.072204 873303.09533556 Erpetoichthys calabaricus 27687 Chordata Chordata 1147 0   NR XP_051788188.1 27687 g0 i1 60.9 0.57209450153618 892 343 28.3 5 3450 6119 2 889 XP_051788188.1 uncharacterized protein LOC127529223 [Erpetoichthys calabaricus] diamond 5400 1147 1 Eukaryota Opisthokonta Metazoa Chordata Cladistia Polypteriformes Polypteridae Erpetoichthys Erpetoichthys calabaricus
27263970 27263970 PRJNA293022_P_NODE_3_length_9310_cov_9325.310334_g0_i2 PRJNA293022 3 9310 9325.310334 868186.3920954 Erpetoichthys calabaricus 27687 Chordata Chordata 1147 0   NR XP_051788188.1 27687 g0 i2 60.9 0.57937701396348 892 343 28.7 5 3321 5990 2 889 XP_051788188.1 uncharacterized protein LOC127529223 [Erpetoichthys calabaricus] diamond 5394 1147 1 Eukaryota Opisthokonta Metazoa Chordata Cladistia Polypteriformes Polypteridae Erpetoichthys Erpetoichthys calabaricus
27548086 27548086 PRJNA293022_P_NODE_63004_length_175_cov_1.055556_g62267_i0 PRJNA293022 63004 175 1.055556 1.847223 Staurois parvus 386267 Chordata Chordata 45.4 1.19e-4   NR CAI9619281.1 386267 g62267 i0 69.2 0.445714285714286 26 8 44.6 0 80 3 20 45 CAI9619281.1 unnamed protein product [Staurois parvus] diamond 78 45.4 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Ranidae Staurois Staurois parvus
27927033 27927033 PRJNA293022_P_NODE_29065_length_261_cov_1.193396_g28328_i0 PRJNA293022 29065 261 1.193396 3.11476356 Staurois parvus 386267 Chordata Chordata 53.5 9.72e-7   NR CAI9557087.1 386267 g28328 i0 63.9 0.827586206896552 36 11 39.1 1 178 77 24 59 CAI9557087.1 unnamed protein product, partial [Staurois parvus] diamond 216 53.5 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Ranidae Staurois Staurois parvus
28242599 28242599 PRJNA293022_P_NODE_52726_length_192_cov_1.174825_g51989_i0 PRJNA293022 52726 192 1.174825 2.255664 Staurois parvus 386267 Chordata Chordata 47 4.08e-5   NR CAI9622145.1 386267 g51989 i0 68.6 0.546875 35 11 54.7 0 1 105 15 49 CAI9622145.1 unnamed protein product [Staurois parvus] diamond 105 47 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Ranidae Staurois Staurois parvus
28242604 28242604 PRJNA293022_P_NODE_70886_length_167_cov_0.881356_g70149_i0 PRJNA293022 70886 167 0.881356 1.47186452 Scyliorhinus torazame 75743 Chordata Chordata 51.2 5.06e-6   NR GCB79319.1 75743 g70149 i0 55.8 28.0059880239521 52 23 93.4 0 161 6 100 151 GCB79319.1 hypothetical protein [Scyliorhinus torazame] diamond 4677 51.6 0.992248062015504 Eukaryota Opisthokonta Metazoa Chordata Chondrichthyes Carcharhiniformes Scyliorhinidae Scyliorhinus Scyliorhinus torazame
28368982 28368982 PRJNA293022_P_NODE_9406_length_467_cov_1.964115_g8675_i0 PRJNA293022 9406 467 1.964115 9.17241705 Balaenoptera physalus 9770 Chordata Chordata 49.7 2.24e-4   NR KAB0401909.1 9770 g8675 i0 37.6 0.597430406852248 93 53 57.8 3 311 42 13 103 KAB0401909.1 hypothetical protein E2I00_017869, partial [Balaenoptera physalus] diamond 279 49.7 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Balaenopteridae Balaenoptera Balaenoptera physalus
28432255 28432255 PRJNA293022_P_NODE_6_length_7472_cov_9431.905564_g0_i4 PRJNA293022 6 7472 9431.905564 704751.98374208 Carcharodon carcharias 13397 Chordata Chordata 798 3.7e-259   NR XP_041058168.1 13397 g0 i4 68.4 0.217210920770878 541 168 21.7 2 3134 4756 2 539 XP_041058168.1 uncharacterized protein LOC121285616 [Carcharodon carcharias] diamond 1623 798 1 Eukaryota Opisthokonta Metazoa Chordata Chondrichthyes Lamniformes Alopiidae Carcharodon Carcharodon carcharias
28590258 28590258 PRJNA293022_P_NODE_77707_length_163_cov_0.912281_g76970_i0 PRJNA293022 77707 163 0.912281 1.48701803 Mobula hypostoma 723540 Chordata Chordata 48.5 1.16e-4   NR XP_062916020.1 723540 g76970 i0 56.8 0.680981595092024 37 16 68.1 0 135 25 518 554 XP_062916020.1 nesprin-2 isoform X2 [Mobula hypostoma] diamond 111 48.5 1 Eukaryota Opisthokonta Metazoa Chordata Chondrichthyes Myliobatiformes Myliobatidae Mobula Mobula hypostoma
28937495 28937495 PRJNA293022_P_NODE_68_length_2640_cov_10794.695484_g0_i6 PRJNA293022 68 2640 10794.695484 284979.9607776 Carcharodon carcharias 13397 Chordata Chordata 425 2.769999999999999e-134   NR XP_041053337.1 13397 g0 i6 45.3 3.17840909090909 457 248 51.7 1 89 1453 175 631 XP_041053337.1 uncharacterized protein LOC121283180 [Carcharodon carcharias] diamond 8391 425 1 Eukaryota Opisthokonta Metazoa Chordata Chondrichthyes Lamniformes Alopiidae Carcharodon Carcharodon carcharias
28969061 28969061 PRJNA293022_P_NODE_28208_length_265_cov_1.620370_g27471_i0 PRJNA293022 28208 265 1.62037 4.2939805 Leucoraja erinaceus 7782 Chordata Chordata 45.1 0.00592   NR XP_055493306.1 7782 g27471 i0 75 1.14339622641509 28 7 31.7 0 91 174 138 165 XP_055493306.1 uncharacterized protein LOC129698280 [Leucoraja erinaceus] diamond 303 45.1 1 Eukaryota Opisthokonta Metazoa Chordata Chondrichthyes Rajiformes Rajidae Leucoraja Leucoraja erinaceus
29190131 29190131 PRJNA293022_P_NODE_10289_length_446_cov_2.289673_g9554_i0 PRJNA293022 10289 446 2.289673 10.21194158 Ranitomeya imitator 111125 Chordata Chordata 63.5 1.81e-8   NR CAJ0933392.1 111125 g9554 i0 62.5 0.322869955156951 48 16 30.9 1 173 310 53 100 CAJ0933392.1 unnamed protein product [Ranitomeya imitator] diamond 144 63.5 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Dendrobatidae Ranitomeya Ranitomeya imitator
29347934 29347934 PRJNA293022_P_NODE_55049_length_188_cov_0.870504_g54312_i0 PRJNA293022 55049 188 0.87050399999999994 1.63654752 Polypterus senegalus 55291 Chordata Chordata 62.8 1.35e-9   NR KAG2463681.1 55291 g54312 i0 61 0.941489361702128 59 23 94.1 0 7 183 147 205 KAG2463681.1 TCB1 transposase, partial [Polypterus senegalus] diamond 177 62.8 1 Eukaryota Opisthokonta Metazoa Chordata Cladistia Polypteriformes Polypteridae Polypterus Polypterus senegalus
29505623 29505623 PRJNA293022_P_NODE_25830_length_277_cov_12.276316_g25093_i0 PRJNA293022 25830 277 12.276316 34.00539532 Naja naja 35670 Chordata Chordata 42.4 0.0196   NR KAG8138624.1 35670 g25093 i0 59.1 0.23826714801444 22 9 23.8 0 69 4 43 64 KAG8138624.1 hypothetical protein E2320_001439 [Naja naja] diamond 66 42.4 1 Eukaryota Opisthokonta Metazoa Chordata Lepidosauria Squamata Elapidae Naja Naja naja
29631731 29631731 PRJNA293022_P_NODE_74310_length_165_cov_0.896552_g73573_i0 PRJNA293022 74310 165 0.896552 1.4793108 Ranitomeya imitator 111125 Chordata Chordata 43.9 0.00504   NR CAJ0952439.1 111125 g73573 i0 48.9 0.818181818181818 45 23 81.8 0 30 164 668 712 CAJ0952439.1 unnamed protein product [Ranitomeya imitator] diamond 135 43.9 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Dendrobatidae Ranitomeya Ranitomeya imitator
29853135 29853135 PRJNA293022_P_NODE_71031_length_167_cov_0.881356_g70294_i0 PRJNA293022 71031 167 0.881356 1.47186452 Erpetoichthys calabaricus 27687 Chordata Chordata 45.4 0.00148   NR XP_028656942.1 27687 g70294 i0 82.6 0.413173652694611 23 4 41.3 0 73 5 100 122 XP_028656942.1 protein ZBED8-like [Erpetoichthys calabaricus] diamond 69 45.4 1 Eukaryota Opisthokonta Metazoa Chordata Cladistia Polypteriformes Polypteridae Erpetoichthys Erpetoichthys calabaricus
30074049 30074049 PRJNA293022_P_NODE_45492_length_207_cov_1.202532_g44755_i0 PRJNA293022 45492 207 1.202532 2.48924124 Polypterus senegalus 55291 Chordata Chordata 43.5 0.0124   NR KAG2463379.1 55291 g44755 i0 64.5 5.97101449275362 31 11 44.9 0 4 96 313 343 KAG2463379.1 TCB1 transposase, partial [Polypterus senegalus] diamond 1236 43.5 1 Eukaryota Opisthokonta Metazoa Chordata Cladistia Polypteriformes Polypteridae Polypterus Polypterus senegalus
30692044 30692044 PRJNA293022_P_NODE_72553_length_166_cov_0.888889_g71816_i0 PRJNA293022 72553 166 0.888889 1.47555574 Chordata 7711 Chordata Chordata 69.3 5.54e-12   NR XP_043830454.1 33562 g71816 i0 60.4 23.5843373493976 48 19 86.7 0 160 17 26 73 XP_043830454.1 heat shock factor protein 3-like isoform X2 [Dromiciops gliroides] diamond 3915 69.7 0.994261119081779 Eukaryota Opisthokonta Metazoa Chordata Mammalia Microbiotheria Microbiotheriidae Dromiciops Dromiciops gliroides
31102714 31102714 PRJNA293022_P_NODE_77215_length_163_cov_0.912281_g76478_i0 PRJNA293022 77215 163 0.912281 1.48701803 Aves 8782 Chordata Chordata 42.4 0.0139   NR XP_055674138.1 8954 g76478 i0 47.2 3.92024539877301 36 19 66.3 0 159 52 46 81 XP_055674138.1 vitelline membrane outer layer protein 1 homolog [Falco peregrinus] diamond 639 42.4 1 Eukaryota Opisthokonta Metazoa Chordata Aves Falconiformes Falconidae Falco Falco peregrinus
31496505 31496505 PRJNA293022_P_NODE_23916_length_289_cov_2.133333_g23179_i0 PRJNA293022 23916 289 2.133333 6.16533237 Leucoraja erinaceus 7782 Chordata Chordata 50.8 7.96e-5   NR XP_055487001.1 7782 g23179 i0 54.4 1.79584775086505 57 23 57.1 2 7 171 160 215 XP_055487001.1 E3 ubiquitin-protein ligase TRIM47-like isoform X1 [Leucoraja erinaceus] diamond 519 50.8 1 Eukaryota Opisthokonta Metazoa Chordata Chondrichthyes Rajiformes Rajidae Leucoraja Leucoraja erinaceus
31875715 31875715 PRJNA293022_P_NODE_33537_length_241_cov_4.598958_g32800_i0 PRJNA293022 33537 241 4.598958 11.08348878 Varanus komodoensis 61221 Chordata Chordata 82 1.21e-16   NR KAF7248073.1 61221 g32800 i0 64.5 0.771784232365145 62 21 75.9 1 1 183 77 138 KAF7248073.1 Neuronal vesicle trafficking-associated protein 1 [Varanus komodoensis] diamond 186 82 1 Eukaryota Opisthokonta Metazoa Chordata Lepidosauria Squamata Varanidae Varanus Varanus komodoensis
31939005 31939005 PRJNA293022_P_NODE_55117_length_187_cov_4.695652_g54380_i0 PRJNA293022 55117 187 4.695652 8.78086924 Myxine glutinosa 7769 Chordata Chordata 47 5.75e-4   NR XP_067964253.1 7769 g54380 i0 51.9 0.834224598930481 52 16 69 1 8 136 699 750 XP_067964253.1 solute carrier family 45 member 4-like isoform X2 [Myxine glutinosa] diamond 156 47 1 Eukaryota Opisthokonta Metazoa Chordata Myxini Myxiniformes Myxinidae Myxine Myxine glutinosa
31939011 31939011 PRJNA293022_P_NODE_9137_length_473_cov_4.740566_g8406_i0 PRJNA293022 9137 473 4.740566 22.42287718 Leucoraja erinaceus 7782 Chordata Chordata 62.8 2.6e-8   NR XP_055487001.1 7782 g8406 i0 58.2 0.348837209302326 55 22 34.2 1 471 310 159 213 XP_055487001.1 E3 ubiquitin-protein ligase TRIM47-like isoform X1 [Leucoraja erinaceus] diamond 165 62.8 1 Eukaryota Opisthokonta Metazoa Chordata Chondrichthyes Rajiformes Rajidae Leucoraja Leucoraja erinaceus
32666343 32666343 PRJNA293022_P_NODE_38000_length_226_cov_4.638418_g37263_i0 PRJNA293022 38000 226 4.638418 10.48282468 Ranitomeya imitator 111125 Chordata Chordata 69.3 1.21e-11   NR CAJ0927840.1 111125 g37263 i0 72.5 0.530973451327434 40 11 53.1 0 205 86 119 158 CAJ0927840.1 unnamed protein product [Ranitomeya imitator] diamond 120 69.3 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Dendrobatidae Ranitomeya Ranitomeya imitator
32666347 32666347 PRJNA293022_P_NODE_57880_length_183_cov_1.253731_g57143_i0 PRJNA293022 57880 183 1.253731 2.29432773 Bufotes viridis 30338 Chordata Chordata 45.1 0.00249   NR CAK8629749.1 30338 g57143 i0 52.9 0.557377049180328 34 16 55.7 0 176 75 331 364 CAK8629749.1 Interleukin-1 receptor type 1 [Bufotes viridis] diamond 102 45.1 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Bufonidae Bufotes Bufotes viridis
32778241 32778241 PRJNA293022_P_NODE_72580_length_166_cov_0.888889_g71843_i0 PRJNA293022 72580 166 0.888889 1.47555574 Metazoa 33208 Chordata Chordata 42.4 0.0187   NR KAI8506615.1 7741 g71843 i0 46.5 3.23493975903614 43 23 77.7 0 16 144 1448 1490 KAI8506615.1 hypothetical protein Bbelb_160420 [Branchiostoma belcheri] diamond 537 42.4 1 Eukaryota Opisthokonta Metazoa Chordata Leptocardii Amphioxiformes Branchiostomatidae Branchiostoma Branchiostoma belcheri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;