RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA293022" and tax_phylum = "Candidatus Altimarinota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Altimarinota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA293022 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27579651 27579651 PRJNA293022_P_NODE_75444_length_164_cov_0.904348_g74707_i0 PRJNA293022 75444 164 0.904348 1.48313072 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 57.4 8.25e-8   NR MFO0764325.1 2044595 g74707 i0 56.6 0.969512195121951 53 23 97 0 160 2 80 132 MFO0764325.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 159 57.4 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
30439542 30439542 PRJNA293022_P_NODE_72833_length_166_cov_0.888889_g72096_i0 PRJNA293022 72833 166 0.888889 1.47555574 Bacteria 2 Bacteria Bacteria 63.2 8.21e-10   NR OIO76195.1 1805210 g72096 i0 65.3 1.7710843373494 49 15 88.6 2 148 2 127 173 OIO76195.1 MAG: hypothetical protein AUJ87_03385 [Candidatus Gracilibacteria bacterium CG1_02_38_174] diamond 294 63.2 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium CG1_02_38_174
31370025 31370025 PRJNA293022_P_NODE_69236_length_168_cov_0.873950_g68499_i0 PRJNA293022 69236 168 0.87395 1.468236 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 51.6 2.73e-6   NR MDD5769406.1 2044595 g68499 i0 64.3 1.5 42 15 75 0 127 2 70 111 MDD5769406.1 ATP synthase F1 subunit epsilon [Candidatus Altimarinota bacterium] diamond 252 51.6 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
31812592 31812592 PRJNA293022_P_NODE_75537_length_164_cov_0.904348_g74800_i0 PRJNA293022 75537 164 0.904348 1.48313072 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 79 2.19e-15   NR RKW22229.1 2044595 g74800 i0 76.7 0.786585365853659 43 10 78.7 0 35 163 1037 1079 RKW22229.1 MAG: DUF11 domain-containing protein [Candidatus Altimarinota bacterium] diamond 129 79 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;