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contig_metadata

34 rows where analysis = "diamond", bioproject = "PRJNA293022" and tax_phylum = "Bacillota"

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tax_superkingdom 1

tax_phylum 1

  • Bacillota · 34 ✖

tax_kingdom 1

bioproject 1

  • PRJNA293022 · 34 ✖

analysis 1

  • diamond · 34 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1059738 1059738 PRJNA293022_P_NODE_46361_length_205_cov_1.294872_g45624_i0 PRJNA293022 46361 205 1.294872 2.6544876 Bacteria 2 Bacteria Bacteria 137 1.44e-40   NR MCL5460119.1 1610 g45624 i0 92.5 8.82439024390244 67 5 98 0 3 203 6 72 MCL5460119.1 DNA primase [Loigolactobacillus coryniformis] diamond 1809 137 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Lactobacillaceae Loigolactobacillus Loigolactobacillus coryniformis
1648241 1648241 PRJNA293022_P_NODE_77582_length_163_cov_0.912281_g76845_i0 PRJNA293022 77582 163 0.912281 1.48701803 uncultured Selenomonas sp. 159275 Bacteria Bacteria 68.9 6.4e-13   NR WP_298586358.1 159275 g76845 i0 100 0.644171779141104 35 0 64.4 0 160 56 121 155 WP_298586358.1 dihydropteroate synthase [uncultured Selenomonas sp.] diamond 105 68.9 1 Bacteria   Bacillati Bacillota Negativicutes Selenomonadales Selenomonadaceae Selenomonas uncultured Selenomonas sp.
13127230 13127230 PRJNA293022_P_NODE_70771_length_167_cov_0.881356_g70034_i0 PRJNA293022 70771 167 0.881356 1.47186452 Falseniella ignava 137730 Bacteria Bacteria 119 2.16e-30   NR WP_101953990.1 137730 g70034 i0 100 0.970059880239521 54 0 97 0 164 3 106 159 WP_101953990.1 glycine/sarcosine/betaine reductase component B subunit [Falseniella ignava] diamond 162 119 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Aerococcaceae Falseniella Falseniella ignava
15676129 15676129 PRJNA293022_P_NODE_62993_length_175_cov_1.142857_g62256_i0 PRJNA293022 62993 175 1.142857 1.99999975 Blautia obeum ATCC 29174 411459 Bacteria Bacteria 55.1 3.11e-7   NR EDM87878.1 411459 g62256 i0 59.5 0.72 42 17 72 0 48 173 154 195 EDM87878.1 hypothetical protein RUMOBE_01293 [Blautia obeum ATCC 29174] diamond 126 55.1 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae Blautia Blautia obeum
20185866 20185866 PRJNA293022_P_NODE_75416_length_164_cov_0.904348_g74679_i0 PRJNA293022 75416 164 0.904348 1.48313072 Eubacterium nodatum ATCC 33 35518 Bacteria Bacteria 117 2.09e-29   NR ETK00196.1 1161902 g74679 i0 100 1.95731707317073 54 0 98.8 0 2 163 251 304 ETK00196.1 gamma-aminobutyrate metabolism dehydratase/isomerase [Eubacterium nodatum ATCC 33099] diamond 321 117 1 Bacteria   Bacillati Bacillota Clostridia Peptostreptococcales Anaerovoracaceae   [Eubacterium] nodatum
23325319 23325319 PRJNA293022_P_NODE_38919_length_224_cov_1.177143_g38182_i0 PRJNA293022 38919 224 1.177143 2.63680032 Streptococcus 1301 Bacteria Bacteria 115 5.42e-28   NR RKV63735.1 1306 g38182 i0 100 5.78571428571429 72 0 96.4 0 4 219 140 211 RKV63735.1 MAG: hypothetical protein D8H99_71635, partial [Streptococcus sp.] diamond 1296 115 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus sp.
26631048 26631048 PRJNA293022_P_NODE_72661_length_166_cov_0.888889_g71924_i0 PRJNA293022 72661 166 0.888889 1.47555574 uncultured Gemella sp. 254352 Bacteria Bacteria 103 4.989999999999999e-24   NR WP_299323809.1 254352 g71924 i0 94.5 1.98795180722892 55 3 99.4 0 2 166 187 241 WP_299323809.1 formate C-acetyltransferase [uncultured Gemella sp.] diamond 330 103 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Gemellaceae Gemella uncultured Gemella sp.
27074175 27074175 PRJNA293022_P_NODE_73822_length_165_cov_0.896552_g73085_i0 PRJNA293022 73822 165 0.896552 1.4793108 Dialister invisus 218538 Bacteria Bacteria 105 5.25e-26   NR WP_273058859.1 218538 g73085 i0 100 2.89090909090909 53 0 96.4 0 6 164 137 189 WP_273058859.1 ABC transporter ATP-binding protein [Dialister invisus] diamond 477 105 1 Bacteria   Bacillati Bacillota Negativicutes Veillonellales Veillonellaceae Dialister Dialister invisus
27769418 27769418 PRJNA293022_P_NODE_24944_length_283_cov_0.931624_g24207_i0 PRJNA293022 24944 283 0.931624 2.63649592 Candidatus Blautia intestinavium 2838491 Bacteria Bacteria 43.1 0.0402   NR HIW49895.1 2838491 g24207 i0 40.4 0.498233215547703 47 28 49.8 0 108 248 140 186 HIW49895.1 XdhC family protein [Candidatus Blautia intestinavium] diamond 141 43.1 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae Blautia Candidatus Blautia intestinavium
27849745 27849745 PRJNA293022_P_NODE_69304_length_168_cov_0.873950_g68567_i0 PRJNA293022 69304 168 0.87395 1.468236 Bacillaceae 186817 Bacteria Bacteria 62.8 6.91e-11   NR WP_054753879.1 299480 g68567 i0 86.5 2.64285714285714 37 5 66.1 0 56 166 1 37 WP_054753879.1 50S ribosomal protein L22 [Piscibacillus salipiscarius] diamond 444 62.8 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Piscibacillus Piscibacillus salipiscarius
27912850 27912850 PRJNA293022_P_NODE_45545_length_207_cov_0.778481_g44808_i0 PRJNA293022 45545 207 0.778481 1.61145567 Gemella 1378 Bacteria Bacteria 123 8.669999999999998e-31   NR WP_304096486.1 1379 g44808 i0 95.6 1.97101449275362 68 3 98.6 0 4 207 1172 1239 WP_304096486.1 YSIRK-type signal peptide-containing protein, partial [Gemella haemolysans] diamond 408 123 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Gemellaceae Gemella Gemella haemolysans
28337519 28337519 PRJNA293022_P_NODE_74246_length_165_cov_0.896552_g73509_i0 PRJNA293022 74246 165 0.896552 1.4793108 Streptococcus mitis 28037 Bacteria Bacteria 87.8 1.66e-18   NR MDU5459190.1 28037 g73509 i0 92.5 0.963636363636364 53 4 96.4 0 6 164 263 315 MDU5459190.1 YSIRK-type signal peptide-containing protein [Streptococcus mitis] diamond 159 87.8 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus mitis
28337521 28337521 PRJNA293022_P_NODE_79746_length_162_cov_0.920354_g79009_i0 PRJNA293022 79746 162 0.920354 1.49097348 Selenomonas massiliensis 2058293 Bacteria Bacteria 96.7 6.66e-22   NR MFC2315761.1 2058293 g79009 i0 97.7 0.814814814814815 44 1 81.5 0 30 161 126 169 MFC2315761.1 porin [Selenomonas massiliensis] diamond 132 96.7 1 Bacteria   Bacillati Bacillota Negativicutes Selenomonadales Selenomonadaceae Selenomonas Selenomonas massiliensis
28386609 28386609 PRJNA293022_P_NODE_75686_length_164_cov_0.904348_g74949_i0 PRJNA293022 75686 164 0.904348 1.48313072 Gemella 1378 Bacteria Bacteria 101 1.72e-25   NR MDU8070597.1 1379 g74949 i0 100 1.9390243902439 53 0 97 0 160 2 57 109 MDU8070597.1 hypothetical protein [Gemella haemolysans] diamond 318 101 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Gemellaceae Gemella Gemella haemolysans
28495507 28495507 PRJNA293022_P_NODE_79527_length_162_cov_0.920354_g78790_i0 PRJNA293022 79527 162 0.920354 1.49097348 Leuconostoc holzapfelii 434464 Bacteria Bacteria 95.9 2.32e-21   NR WP_261657515.1 434464 g78790 i0 100 0.907407407407407 49 0 90.7 0 3 149 232 280 WP_261657515.1 Tex family protein [Leuconostoc holzapfelii] diamond 147 95.9 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Lactobacillaceae Leuconostoc Leuconostoc holzapfelii
28621781 28621781 PRJNA293022_P_NODE_34007_length_240_cov_1.078534_g33270_i0 PRJNA293022 34007 240 1.078534 2.5884816 Proteiniclasticum sp. C24MP 3374101 Bacteria Bacteria 45.1 0.00523   NR WP_395268443.1 3374101 g33270 i0 39.4 0.8875 71 38 82.5 2 35 232 77 147 WP_395268443.1 iron-containing alcohol dehydrogenase [Proteiniclasticum sp. C24MP] diamond 213 45.1 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Clostridiaceae Proteiniclasticum Proteiniclasticum sp. C24MP
28716477 28716477 PRJNA293022_P_NODE_20327_length_316_cov_1.348315_g19590_i0 PRJNA293022 20327 316 1.348315 4.2606754 Clostridium sporogenes 1509 Bacteria Bacteria 47.8 0.00139   NR WP_253290184.1 1509 g19590 i0 35.4 0.75 79 47 75 2 286 50 104 178 WP_253290184.1 hypothetical protein [Clostridium sporogenes] diamond 237 47.8 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales Clostridiaceae Clostridium Clostridium sporogenes
28716483 28716483 PRJNA293022_P_NODE_74247_length_165_cov_0.896552_g73510_i0 PRJNA293022 74247 165 0.896552 1.4793108 Clostridiisalibacter paucivorans 408753 Bacteria Bacteria 40.8 0.0248   NR WP_205687667.1 408753 g73510 i0 58.8 0.618181818181818 34 12 58.2 1 8 103 83 116 WP_205687667.1 encapsulin-associated ferritin-like protein [Clostridiisalibacter paucivorans] diamond 102 40.8 1 Bacteria   Bacillati Bacillota Tissierellia Tissierellales Thermohalobacteraceae Clostridiisalibacter Clostridiisalibacter paucivorans
29063826 29063826 PRJNA293022_P_NODE_27048_length_271_cov_0.869369_g26311_i0 PRJNA293022 27048 271 0.869369 2.35598999 Clostridia bacterium 2044939 Bacteria Bacteria 42.7 0.0486   NR MBO5955322.1 2044939 g26311 i0 33.9 0.653136531365314 59 37 65.3 1 33 209 180 236 MBO5955322.1 metallophosphoesterase [Clostridia bacterium] diamond 177 42.7 1 Bacteria   Bacillati Bacillota Clostridia       Clostridia bacterium
29428369 29428369 PRJNA293022_P_NODE_74309_length_165_cov_0.896552_g73572_i0 PRJNA293022 74309 165 0.896552 1.4793108 Selenomonadaceae 1843491 Bacteria Bacteria 84.7 9.24e-18   NR WP_040394554.1 82203 g73572 i0 97.6 1.54545454545455 42 1 76.4 0 164 39 294 335 WP_040394554.1 biotin synthase BioB [Centipeda periodontii] diamond 255 85.5 0.990643274853801 Bacteria   Bacillati Bacillota Negativicutes Selenomonadales Selenomonadaceae Centipeda Centipeda periodontii
29459875 29459875 PRJNA293022_P_NODE_79370_length_162_cov_0.920354_g78633_i0 PRJNA293022 79370 162 0.920354 1.49097348 Anaerovorax 109326 Bacteria Bacteria 51.6 2.98e-6   NR WP_256132943.1 109327 g78633 i0 54.5 3.2037037037037 44 20 81.5 0 28 159 1 44 WP_256132943.1 regulatory protein RecX [Anaerovorax odorimutans] diamond 519 51.6 1 Bacteria   Bacillati Bacillota Clostridia Peptostreptococcales Anaerovoracaceae Anaerovorax Anaerovorax odorimutans
29853133 29853133 PRJNA293022_P_NODE_62951_length_175_cov_1.222222_g62214_i0 PRJNA293022 62951 175 1.222222 2.1388885 uncultured Anaerotignum sp. 2039243 Bacteria Bacteria 48.9 1e-4   NR WP_294680500.1 2039243 g62214 i0 53.7 2.34857142857143 41 19 70.3 0 151 29 419 459 WP_294680500.1 tetratricopeptide repeat protein [uncultured Anaerotignum sp.] diamond 411 48.9 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Anaerotignaceae Anaerotignum uncultured Anaerotignum sp.
29979400 29979400 PRJNA293022_P_NODE_72831_length_166_cov_0.888889_g72094_i0 PRJNA293022 72831 166 0.888889 1.47555574 Bulleidia extructa 118748 Bacteria Bacteria 103 3.66e-24   NR WP_006626830.1 118748 g72094 i0 100 0.975903614457831 54 0 97.6 0 163 2 2 55 WP_006626830.1 ribonucleoside-diphosphate reductase subunit alpha [Bulleidia extructa] diamond 162 103 1 Bacteria   Bacillati Bacillota Erysipelotrichia Erysipelotrichales Erysipelotrichaceae Bulleidia Bulleidia extructa
30200347 30200347 PRJNA293022_P_NODE_69512_length_168_cov_0.873950_g68775_i0 PRJNA293022 69512 168 0.87395 1.468236 uncultured Lachnoanaerobaculum sp. 1662275 Bacteria Bacteria 109 3.3200000000000004e-26   NR WP_009218977.1 1662275 g68775 i0 94.5 0.982142857142857 55 3 98.2 0 3 167 581 635 WP_009218977.1 transketolase [uncultured Lachnoanaerobaculum sp.] diamond 165 109 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae Lachnoanaerobaculum uncultured Lachnoanaerobaculum sp.
30534070 30534070 PRJNA293022_P_NODE_72453_length_166_cov_0.888889_g71716_i0 PRJNA293022 72453 166 0.888889 1.47555574 Bacillati 1783272 Bacteria Bacteria 48.1 1.67e-4   NR PKM56417.1 2013784 g71716 i0 48 2.6566265060241 50 24 86.7 1 16 159 568 617 PKM56417.1 MAG: hypothetical protein CVU98_11380 [Firmicutes bacterium HGW-Firmicutes-3] diamond 441 48.5 0.991752577319588 Bacteria   Bacillati Bacillota         Firmicutes bacterium HGW-Firmicutes-3
31053947 31053947 PRJNA293022_P_NODE_76135_length_164_cov_0.904348_g75398_i0 PRJNA293022 76135 164 0.904348 1.48313072 Streptococcus mitis 28037 Bacteria Bacteria 99 2.01e-22   NR WP_136937432.1 28037 g75398 i0 100 7.90243902439024 54 0 98.8 0 162 1 1530 1583 WP_136937432.1 mucin-binding protein, partial [Streptococcus mitis] diamond 1296 99 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Streptococcaceae Streptococcus Streptococcus mitis
31179709 31179709 PRJNA293022_P_NODE_74155_length_165_cov_0.896552_g73418_i0 PRJNA293022 74155 165 0.896552 1.4793108 Selenomonas dianae 135079 Bacteria Bacteria 97.4 1.2299999999999997e-23   NR WP_304987023.1 135079 g73418 i0 88.7 4.81818181818182 53 6 96.4 0 4 162 82 134 WP_304987023.1 DUF6470 family protein [Selenomonas dianae] diamond 795 97.4 1 Bacteria   Bacillati Bacillota Negativicutes Selenomonadales Selenomonadaceae Selenomonas Selenomonas dianae
31292427 31292427 PRJNA293022_P_NODE_79195_length_162_cov_0.920354_g78458_i0 PRJNA293022 79195 162 0.920354 1.49097348 Bacteria 2 Bacteria Bacteria 46.6 1.74e-4   NR NLD03724.1 1898207 g78458 i0 38.8 1.81481481481481 49 30 90.7 0 16 162 6 54 NLD03724.1 hypothetical protein [Clostridiales bacterium] diamond 294 46.6 1 Bacteria   Bacillati Bacillota Clostridia Eubacteriales     Clostridiales bacterium
31432985 31432985 PRJNA293022_P_NODE_56596_length_185_cov_1.514706_g55859_i0 PRJNA293022 56596 185 1.514706 2.8022061 Paenibacillus xerothermodurans 1977292 Bacteria Bacteria 69.7 1.98e-13   NR WP_089201178.1 1977292 g55859 i0 71.4 0.681081081081081 42 12 68.1 0 43 168 4 45 WP_089201178.1 group I truncated hemoglobin [Paenibacillus xerothermodurans] diamond 126 69.7 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Paenibacillaceae Paenibacillus Paenibacillus xerothermodurans
31591381 31591381 PRJNA293022_P_NODE_69456_length_168_cov_0.873950_g68719_i0 PRJNA293022 69456 168 0.87395 1.468236 Rummeliibacillus pycnus 101070 Bacteria Bacteria 48.5 5.59e-5   NR WP_397536610.1 101070 g68719 i0 56.1 0.732142857142857 41 17 71.4 1 149 30 78 118 WP_397536610.1 acyl-CoA thioesterase [Rummeliibacillus pycnus] diamond 123 48.5 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Caryophanaceae Rummeliibacillus Rummeliibacillus pycnus
32083268 32083268 PRJNA293022_P_NODE_67438_length_169_cov_0.866667_g66701_i0 PRJNA293022 67438 169 0.866667 1.46466723 Gemella 1378 Bacteria Bacteria 91.7 7.31e-20   NR WP_271987095.1 1379 g66701 i0 94.5 3.90532544378698 55 3 97.6 0 165 1 431 485 WP_271987095.1 DUF1542 domain-containing protein, partial [Gemella haemolysans] diamond 660 91.7 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Gemellaceae Gemella Gemella haemolysans
32209933 32209933 PRJNA293022_P_NODE_73678_length_165_cov_0.896552_g72941_i0 PRJNA293022 73678 165 0.896552 1.4793108 Bacillus 1386 Bacteria Bacteria 63.9 3.51e-10   NR WP_053601944.1 1386 g72941 i0 59.6 1.70909090909091 47 19 85.5 0 154 14 186 232 WP_053601944.1 MULTISPECIES: D-2-hydroxyacid dehydrogenase [Bacillus] diamond 282 63.9 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Bacillus  
32729413 32729413 PRJNA293022_P_NODE_79000_length_162_cov_0.920354_g78263_i0 PRJNA293022 79000 162 0.920354 1.49097348 uncultured Selenomonas sp. 159275 Bacteria Bacteria 108 2.24e-27   NR WP_325189548.1 159275 g78263 i0 100 0.962962962962963 52 0 96.3 0 7 162 33 84 WP_325189548.1 hypothetical protein [uncultured Selenomonas sp.] diamond 156 108 1 Bacteria   Bacillati Bacillota Negativicutes Selenomonadales Selenomonadaceae Selenomonas uncultured Selenomonas sp.
32855229 32855229 PRJNA293022_P_NODE_79360_length_162_cov_0.920354_g78623_i0 PRJNA293022 79360 162 0.920354 1.49097348 Lachnoanaerobaculum saburreum 467210 Bacteria Bacteria 118 1.55e-30   NR WP_008750186.1 467210 g78623 i0 98.1 0.981481481481482 53 1 98.1 0 3 161 245 297 WP_008750186.1 zinc dependent phospholipase C family protein [Lachnoanaerobaculum saburreum] diamond 159 118 1 Bacteria   Bacillati Bacillota Clostridia Lachnospirales Lachnospiraceae Lachnoanaerobaculum Lachnoanaerobaculum saburreum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;