RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA293022" and tax_kingdom = "Thermoproteati"

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tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 2 ✖

bioproject 1

  • PRJNA293022 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30105668 30105668 PRJNA293022_P_NODE_32032_length_247_cov_2.782828_g31295_i0 PRJNA293022 32032 247 2.782828 6.87358516 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 41.6 0.0368   NR MCJ7635429.1 2026714 g31295 i0 26.3 0.97165991902834 80 48 97.2 3 8 247 25 93 MCJ7635429.1 hypothetical protein [Candidatus Bathyarchaeota archaeon] diamond 240 41.6 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
31085276 31085276 PRJNA293022_P_NODE_31415_length_250_cov_1.114428_g30678_i0 PRJNA293022 31415 250 1.114428 2.78607 Thermoproteota archaeon 2056631 Archaea Archaea 43.5 0.0204   NR NLB75480.1 2056631 g30678 i0 44.7 0.564 47 23 52.8 1 209 78 275 321 NLB75480.1 tyrosine decarboxylase MfnA [Thermoproteota archaeon] diamond 141 43.5 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;