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contig_metadata

23 rows where analysis = "diamond", bioproject = "PRJNA293022" and tax_clade = "Embryophyta"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Embryophyta · 23 ✖

bioproject 1

  • PRJNA293022 · 23 ✖

analysis 1

  • diamond · 23 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1648257 1648257 PRJNA293022_P_NODE_79442_length_162_cov_0.920354_g78705_i0 PRJNA293022 79442 162 0.920354 1.49097348 root 1 Root_unresolved Root_unresolved 108 8.01e-26   NR GEU28118.1 118510 g78705 i0 98.1 5.88888888888889 53 1 98.1 0 160 2 1110 1162 GEU28118.1 succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial [Tanacetum cinerariifolium] diamond 954 108 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Tanacetum Tanacetum cinerariifolium
4200592 4200592 PRJNA293022_P_NODE_73784_length_165_cov_0.896552_g73047_i0 PRJNA293022 73784 165 0.896552 1.4793108 Eukaryota 2759 Plants Plants 84.3 2.17e-17   NR XP_050380100.1 57926 g73047 i0 93.3 30.2363636363636 45 3 81.8 0 135 1 52 96 XP_050380100.1 60S ribosomal protein L4-like [Argentina anserina] diamond 4989 85.1 0.990599294947121 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Rosaceae Argentina Argentina anserina
9987865 9987865 PRJNA293022_P_NODE_53868_length_190_cov_1.056738_g53131_i0 PRJNA293022 53868 190 1.056738 2.0078022 Eukaryota 2759 Plants Plants 97.4 6.2299999999999996e-24   NR NP_001236899.1 3847 g53131 i0 80.3 113.415789473684 61 12 96.3 0 185 3 73 133 NP_001236899.1 60S ribosomal protein L23a-like [Glycine max] diamond 21549 97.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Glycine Glycine max
11852077 11852077 PRJNA293022_P_NODE_70990_length_167_cov_0.881356_g70253_i0 PRJNA293022 70990 167 0.881356 1.47186452 Dorcoceras hygrometricum 472368 Plants Plants 86.7 2.54e-18   NR KZV44983.1 472368 g70253 i0 71.2 8.40718562874251 52 15 93.4 0 9 164 250 301 KZV44983.1 hypothetical protein F511_32729 [Dorcoceras hygrometricum] diamond 1404 86.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Gesneriaceae Dorcoceras Dorcoceras hygrometricum
15676215 15676215 PRJNA293022_P_NODE_75693_length_164_cov_0.904348_g74956_i0 PRJNA293022 75693 164 0.904348 1.48313072 Cucurbita moschata 3662 Plants Plants 78.2 3.87e-15   NR XP_022940939.1 3662 g74956 i0 66 15.640243902439 47 16 86 0 161 21 305 351 XP_022940939.1 low-temperature-induced cysteine proteinase-like [Cucurbita moschata] diamond 2565 78.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Cucurbitales Cucurbitaceae Cucurbita Cucurbita moschata
19499085 19499085 PRJNA293022_P_NODE_16456_length_352_cov_1.353135_g15719_i0 PRJNA293022 16456 352 1.353135 4.7630352 Ceratopteris richardii 49495 Plants Plants 136 4.29e-38   NR KAH7443567.1 49495 g15719 i0 64 8.53125 114 39 97.2 1 349 8 60 171 KAH7443567.1 hypothetical protein KP509_02G040500 [Ceratopteris richardii] diamond 3003 136 1 Eukaryota Embryophyta Viridiplantae Streptophyta Polypodiopsida Polypodiales Pteridaceae Ceratopteris Ceratopteris richardii
22049669 22049669 PRJNA293022_P_NODE_30078_length_256_cov_1.487923_g29341_i0 PRJNA293022 30078 256 1.487923 3.80908288 Citrus sinensis 2711 Plants Plants 144 4.55e-43   NR KDO41824.1 2711 g29341 i0 85 0.9375 80 12 93.8 0 15 254 2 81 KDO41824.1 hypothetical protein CISIN_1g036041mg, partial [Citrus sinensis] diamond 240 144 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Sapindales Rutaceae Citrus Citrus sinensis
27344889 27344889 PRJNA293022_P_NODE_49523_length_198_cov_1.389262_g48786_i0 PRJNA293022 49523 198 1.389262 2.75073876 Magnoliopsida 3398 Plants Plants 86.3 3.23e-18   NR KAL1825636.1 4039 g48786 i0 66.2 14.2575757575758 65 22 98.5 0 195 1 95 159 KAL1825636.1 hypothetical protein ACET3Z_012414 [Daucus carota] diamond 2823 86.3 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Apiales Apiaceae Daucus Daucus carota
27516575 27516575 PRJNA293022_P_NODE_78663_length_162_cov_1.362832_g77926_i0 PRJNA293022 78663 162 1.362832 2.20778784 Cephalotus follicularis 3775 Plants Plants 57 9.18e-8   NR GAV57298.1 3775 g77926 i0 54.7 2.94444444444444 53 24 98.1 0 160 2 56 108 GAV57298.1 Ribosomal_S5 domain-containing protein/Ribosomal_S5_C domain-containing protein [Cephalotus follicularis] diamond 477 57 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Oxalidales Cephalotaceae Cephalotus Cephalotus follicularis
27565567 27565567 PRJNA293022_P_NODE_70164_length_167_cov_1.669492_g69427_i0 PRJNA293022 70164 167 1.669492 2.78805164 Eukaryota 2759 Plants Plants 67.4 2.15e-12   NR CAM6005785.1 128184 g69427 i0 70.2 4.31137724550898 47 14 84.4 0 27 167 4 50 CAM6005785.1 unnamed protein product [Sphagnum balticum] diamond 720 67.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Sphagnopsida Sphagnales Sphagnaceae Sphagnum Sphagnum balticum
27818540 27818540 PRJNA293022_P_NODE_52104_length_193_cov_1.430556_g51367_i0 PRJNA293022 52104 193 1.430556 2.76097308 Eukaryota 2759 Plants Plants 125 4.6699999999999996e-32   NR OAP06324.1 3702 g51367 i0 95.2 229.150259067358 63 3 97.9 0 3 191 107 169 OAP06324.1 hypothetical protein AXX17_AT3G52060 [Arabidopsis thaliana] diamond 44226 126 0.992063492063492 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Brassicaceae Arabidopsis Arabidopsis thaliana
28102369 28102369 PRJNA293022_P_NODE_11365_length_424_cov_64.213333_g10628_i0 PRJNA293022 11365 424 64.213333 272.26453192 Eukaryota 2759 Plants Plants 55.1 3.72e-6   NR GKV53457.1 152421 g10628 i0 66.7 0.969339622641509 42 14 29.7 0 110 235 123 164 GKV53457.1 hypothetical protein SLEP1_g59979 [Rubroshorea leprosula] diamond 411 55.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malvales Dipterocarpaceae Rubroshorea Rubroshorea leprosula
28463933 28463933 PRJNA293022_P_NODE_72406_length_166_cov_0.888889_g71669_i0 PRJNA293022 72406 166 0.888889 1.47555574 Vigna mungo 3915 Plants Plants 59.7 1.32e-8   NR WVZ14759.1 3915 g71669 i0 79.4 0.614457831325301 34 7 61.4 0 3 104 133 166 WVZ14759.1 hypothetical protein V8G54_012325 [Vigna mungo] diamond 102 59.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Vigna Vigna mungo
29158599 29158599 PRJNA293022_P_NODE_56609_length_185_cov_1.514706_g55872_i0 PRJNA293022 56609 185 1.514706 2.8022061 Erythroxylum novogranatense 1862640 Plants Plants 65.1 2.13e-10   NR KAJ8748181.1 1862640 g55872 i0 50.8 4.78378378378378 59 29 95.7 0 183 7 309 367 KAJ8748181.1 hypothetical protein K2173_000589 [Erythroxylum novogranatense] diamond 885 65.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malpighiales Erythroxylaceae Erythroxylum Erythroxylum novogranatense
29821222 29821222 PRJNA293022_P_NODE_73711_length_165_cov_0.896552_g72974_i0 PRJNA293022 73711 165 0.896552 1.4793108 Tanacetum cinerariifolium 118510 Plants Plants 52 6.55e-6   NR GFC27256.1 118510 g72974 i0 47 1.2 66 22 98.2 2 162 1 195 259 GFC27256.1 zinc finger, CCHC-type [Tanacetum cinerariifolium] diamond 198 52 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Tanacetum Tanacetum cinerariifolium
30042567 30042567 PRJNA293022_P_NODE_48851_length_199_cov_3.080000_g48114_i0 PRJNA293022 48851 199 3.08 6.1292 Helianthus annuus 4232 Plants Plants 42 0.00922   NR KAJ0524210.1 4232 g48114 i0 32.8 0.964824120603015 64 41 93.5 1 1 186 10 73 KAJ0524210.1 hypothetical protein HanIR_Chr10g0502051 [Helianthus annuus] diamond 192 42 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Helianthus Helianthus annuus
30154723 30154723 PRJNA293022_P_NODE_26532_length_274_cov_1.128889_g25795_i0 PRJNA293022 26532 274 1.128889 3.09315586 Eukaryota 2759 Plants Plants 45.4 0.00571   NR KAK7325439.1 3886 g25795 i0 52.1 1.6970802919708 48 17 52.6 1 260 117 318 359 KAK7325439.1 hypothetical protein VNO80_34489 [Phaseolus coccineus] diamond 465 45.8 0.991266375545852 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Phaseolus Phaseolus coccineus
30232158 30232158 PRJNA293022_P_NODE_72252_length_166_cov_0.888889_g71515_i0 PRJNA293022 72252 166 0.888889 1.47555574 Solanum verrucosum 315347 Plants Plants 47.8 1.36e-4   NR WMV48814.1 315347 g71515 i0 90.9 1.98795180722892 22 2 39.8 0 139 74 154 175 WMV48814.1 hypothetical protein MTR67_042199 [Solanum verrucosum] diamond 330 47.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Solanum Solanum verrucosum
30390586 30390586 PRJNA293022_P_NODE_72573_length_166_cov_0.888889_g71836_i0 PRJNA293022 72573 166 0.888889 1.47555574 Heracleum sosnowskyi 360622 Plants Plants 47.4 3.08e-4   NR KAK1397672.1 360622 g71836 i0 68.3 1.5 41 12 72.3 1 44 163 63 103 KAK1397672.1 hypothetical protein POM88_007535 [Heracleum sosnowskyi] diamond 249 47.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Apiales Apiaceae Heracleum Heracleum sosnowskyi
30737581 30737581 PRJNA293022_P_NODE_73794_length_165_cov_0.896552_g73057_i0 PRJNA293022 73794 165 0.896552 1.4793108 Chenopodium quinoa 63459 Plants Plants 72 5.66e-13   NR XP_021744726.1 63459 g73057 i0 65.9 2.4 44 15 80 0 162 31 290 333 XP_021744726.1 ERBB-3 BINDING PROTEIN 1 [Chenopodium quinoa] diamond 396 72 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Caryophyllales Chenopodiaceae Chenopodium Chenopodium quinoa
31274859 31274859 PRJNA293022_P_NODE_27535_length_268_cov_3.045662_g26798_i0 PRJNA293022 27535 268 3.045662 8.16237416 Tanacetum cinerariifolium 118510 Plants Plants 137 5.12e-38   NR GEU28514.1 118510 g26798 i0 87.8 0.917910447761194 82 9 90.7 1 24 266 127 208 GEU28514.1 elongation factor Tu [Tanacetum cinerariifolium] diamond 246 137 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Tanacetum Tanacetum cinerariifolium
32540565 32540565 PRJNA293022_P_NODE_67459_length_169_cov_0.866667_g66722_i0 PRJNA293022 67459 169 0.866667 1.46466723 Heracleum sosnowskyi 360622 Plants Plants 76.3 2.12e-14   NR KAK1384740.1 360622 g66722 i0 76.6 0.834319526627219 47 11 83.4 0 154 14 808 854 KAK1384740.1 hypothetical protein POM88_022475 [Heracleum sosnowskyi] diamond 141 76.3 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Apiales Apiaceae Heracleum Heracleum sosnowskyi
32558226 32558226 PRJNA293022_P_NODE_57919_length_183_cov_1.149254_g57182_i0 PRJNA293022 57919 183 1.149254 2.10313482 Malpighiales 3646 Plants Plants 50.1 1.52e-5   NR CAI0560564.1 586396 g57182 i0 88.5 2.13114754098361 26 3 42.6 0 180 103 72 97 CAI0560564.1 unnamed protein product [Linum tenue] diamond 390 50.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malpighiales Linaceae Linum Linum tenue

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;