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contig_metadata

13 rows where analysis = "diamond", bioproject = "PRJNA293022" and tax_clade = "Amoebozoa"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 13 ✖

bioproject 1

  • PRJNA293022 · 13 ✖

analysis 1

  • diamond · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
373341 373341 PRJNA293022_P_NODE_57841_length_183_cov_1.432836_g57104_i0 PRJNA293022 57841 183 1.432836 2.62208988 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 95.1 7.76e-22   NR KAH3761736.1 1580589 g57104 i0 66.7 5.01639344262295 60 19 96.7 1 1 177 46 105 KAH3761736.1 protein disulfide-isomerase A6 [Pelomyxa schiedti] diamond 918 95.1 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
26725608 26725608 PRJNA293022_P_NODE_67961_length_169_cov_0.866667_g67224_i0 PRJNA293022 67961 169 0.866667 1.46466723 Dictyostelium purpureum 5786 Evosea other_Eukaryota 61.6 2.9e-9   NR XP_003285271.1 5786 g67224 i0 59.1 0.781065088757396 44 18 78.1 0 167 36 78 121 XP_003285271.1 uncharacterized protein DICPUDRAFT_76201 [Dictyostelium purpureum] diamond 132 61.6 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
26884527 26884527 PRJNA293022_P_NODE_74201_length_165_cov_0.896552_g73464_i0 PRJNA293022 74201 165 0.896552 1.4793108 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 85.1 1.55e-17   NR KAH3763756.1 1580589 g73464 i0 72.2 1.96363636363636 54 15 98.2 0 162 1 61 114 KAH3763756.1 major vault protein [Pelomyxa schiedti] diamond 324 85.1 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
26996744 26996744 PRJNA293022_P_NODE_74062_length_165_cov_0.896552_g73325_i0 PRJNA293022 74062 165 0.896552 1.4793108 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 53.5 1.98e-6   NR XP_004359736.1 261658 g73325 i0 49 2.85454545454545 51 26 92.7 0 163 11 593 643 XP_004359736.1 putative phosphatidylinositol phosphate kinase [Cavenderia fasciculata] diamond 471 53.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
28134219 28134219 PRJNA293022_P_NODE_44225_length_210_cov_1.074534_g43488_i0 PRJNA293022 44225 210 1.074534 2.2565214 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 111 1.6e-26   NR XP_004332832.1 1257118 g43488 i0 75.4 2.95714285714286 69 17 98.6 0 207 1 373 441 XP_004332832.1 Prokumamolisin, putative [Acanthamoeba castellanii str. Neff] diamond 621 111 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28242598 28242598 PRJNA293022_P_NODE_39246_length_223_cov_1.183908_g38509_i0 PRJNA293022 39246 223 1.183908 2.64011484 Dictyostelium purpureum 5786 Evosea other_Eukaryota 81.6 1.34e-17   NR XP_003284479.1 5786 g38509 i0 54 0.847533632286996 63 29 84.8 0 193 5 86 148 XP_003284479.1 uncharacterized protein DICPUDRAFT_148253 [Dictyostelium purpureum] diamond 189 81.6 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
28432253 28432253 PRJNA293022_P_NODE_37826_length_227_cov_1.713483_g37089_i0 PRJNA293022 37826 227 1.713483 3.88960641 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 73.6 2.55e-13   NR XP_004341732.1 1257118 g37089 i0 87.8 1.08370044052863 41 5 54.2 0 3 125 269 309 XP_004341732.1 uncharacterized protein ACA1_198710 [Acanthamoeba castellanii str. Neff] diamond 246 73.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28463932 28463932 PRJNA293022_P_NODE_72066_length_166_cov_0.888889_g71329_i0 PRJNA293022 72066 166 0.888889 1.47555574 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 87.8 1.05e-20   NR XP_004358072.1 1257118 g71329 i0 74.1 3.90361445783133 54 14 97.6 0 164 3 25 78 XP_004358072.1 ribosomal protein L31e, putative [Acanthamoeba castellanii str. Neff] diamond 648 87.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28905603 28905603 PRJNA293022_P_NODE_65068_length_172_cov_1.252033_g64331_i0 PRJNA293022 65068 172 1.252033 2.15349676 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 67.8 2.11e-11   NR PRP80058.1 1890364 g64331 i0 62.3 0.924418604651163 53 20 92.4 0 159 1 212 264 PRP80058.1 tripeptidyl peptidase I precursor [Planoprotostelium fungivorum] diamond 159 67.8 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
29032364 29032364 PRJNA293022_P_NODE_75908_length_164_cov_0.904348_g75171_i0 PRJNA293022 75908 164 0.904348 1.48313072 Paramoeba pemaquidensis 180228 Discosea other_Eukaryota 99 6.819999999999999e-23   NR AEL74961.1 180228 g75171 i0 86.8 1.86585365853659 53 7 97 0 161 3 196 248 AEL74961.1 alpha-tubulin, partial [Paramoeba pemaquidensis] diamond 306 99 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba pemaquidensis
30186486 30186486 PRJNA293022_P_NODE_25272_length_281_cov_1.551724_g24535_i0 PRJNA293022 25272 281 1.551724 4.36034444 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 71.6 3.7e-13   NR KAF2071651.1 133409 g24535 i0 40.2 1.97508896797153 92 53 98.2 1 277 2 79 168 KAF2071651.1 hypothetical protein CYY_007026 [Polysphondylium violaceum] diamond 555 71.6 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
30218115 30218115 PRJNA293022_P_NODE_30772_length_253_cov_1.147059_g30035_i0 PRJNA293022 30772 253 1.147059 2.90205927 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 121 2.29e-33   NR XP_004333102.1 1257118 g30035 i0 71.4 1.99209486166008 84 24 99.6 0 253 2 48 131 XP_004333102.1 ribosomal protein L32, putative [Acanthamoeba castellanii str. Neff] diamond 504 121 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30390582 30390582 PRJNA293022_P_NODE_55593_length_187_cov_1.079710_g54856_i0 PRJNA293022 55593 187 1.07971 2.0190577 Cavenderia fasciculata 261658 Evosea other_Eukaryota 58.2 4.78e-9   NR XP_004350852.1 261658 g54856 i0 45.6 0.914438502673797 57 31 91.4 0 185 15 36 92 XP_004350852.1 40S ribosomal protein S25 [Cavenderia fasciculata] diamond 171 58.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;