contig_metadata
4 rows where analysis = "diamond", bioproject = "PRJNA290839" and tax_phylum = "Bacillota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 20774373 | 20774373 | PRJNA290839_P_NODE_1557_length_243_cov_0.917647_g1536_i0 | PRJNA290839 | 1557 | 243 | 0.917647 | 2.22988221 | Oribacterium | 265975 | Bacteria | Bacteria | 153 | 2.6799999999999993e-43 | NR | WP_040649321.1 | 237576 | g1536 | i0 | 100 | 1.97530864197531 | 80 | 0 | 98.8 | 0 | 2 | 241 | 68 | 147 | WP_040649321.1 galactose ABC transporter substrate-binding protein [Oribacterium sinus] | diamond | 480 | 153 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Oribacterium | Oribacterium sinus | ||
| 27390420 | 27390420 | PRJNA290839_P_NODE_363_length_443_cov_1.035135_g342_i0 | PRJNA290839 | 363 | 443 | 1.035135 | 4.58564805 | Eubacteriales bacterium | 2831996 | Bacteria | Bacteria | 100 | 1.21e-22 | NR | MDO4331922.1 | 2831996 | g342 | i0 | 42.6 | 1.00225733634312 | 148 | 77 | 96.2 | 4 | 14 | 439 | 6 | 151 | MDO4331922.1 biotin--[acetyl-CoA-carboxylase] ligase [Eubacteriales bacterium] | diamond | 444 | 100 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Eubacteriales bacterium | ||||
| 31211163 | 31211163 | PRJNA290839_P_NODE_915_length_267_cov_1.427835_g894_i0 | PRJNA290839 | 915 | 267 | 1.427835 | 3.81231945 | Sporofaciens musculi | 2681861 | Bacteria | Bacteria | 160 | 1.31e-44 | NR | WP_159755537.1 | 2681861 | g894 | i0 | 92 | 0.98876404494382 | 88 | 7 | 98.9 | 0 | 2 | 265 | 100 | 187 | WP_159755537.1 DUF3794 and LysM peptidoglycan-binding domain-containing protein [Sporofaciens musculi] | diamond | 264 | 160 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Sporofaciens | Sporofaciens musculi | ||
| 32129166 | 32129166 | PRJNA290839_P_NODE_1278_length_248_cov_0.891429_g1257_i0 | PRJNA290839 | 1278 | 248 | 0.891429 | 2.21074392 | Oribacterium sinus F | 237576 | Bacteria | Bacteria | 62.4 | 9.69e-11 | NR | EEJ50775.1 | 585501 | g1257 | i0 | 79.5 | 0.471774193548387 | 39 | 8 | 47.2 | 0 | 127 | 243 | 12 | 50 | EEJ50775.1 hypothetical protein HMPREF6123_1926 [Oribacterium sinus F0268] | diamond | 117 | 62.4 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Oribacterium | Oribacterium sinus |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;