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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA290839" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 4 ✖

bioproject 1

  • PRJNA290839 · 4 ✖

analysis 1

  • diamond · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27154597 27154597 PRJNA290839_P_NODE_962_length_259_cov_0.994624_g941_i0 PRJNA290839 962 259 0.994624 2.57607616 Methanobrevibacter 2172 Archaea Archaea 47 0.00148   NR MBR0370732.1 66852 g941 i0 37 4.22779922779923 73 46 84.6 0 12 230 3063 3135 MBR0370732.1 Ig-like domain repeat protein [Methanobrevibacter sp.] diamond 1095 47 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
27927025 27927025 PRJNA290839_P_NODE_1165_length_250_cov_0.881356_g1144_i0 PRJNA290839 1165 250 0.881356 2.20339 Thermoplasmata archaeon 1906666 Archaea Archaea 112 6.79e-27   NR MCD6236474.1 1906666 g1144 i0 62.2 2.856 82 30 97.2 1 4 246 226 307 MCD6236474.1 AMP-binding protein [Thermoplasmata archaeon] diamond 714 112 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
28116375 28116375 PRJNA290839_P_NODE_1565_length_243_cov_0.911765_g1544_i0 PRJNA290839 1565 243 0.911765 2.21558895 Candidatus Methanophagales archaeon 2056316 Archaea Archaea 42.7 0.0285   NR MCD6209521.1 2056316 g1544 i0 38.9 0.666666666666667 54 33 66.7 0 200 39 22 75 MCD6209521.1 hypothetical protein [Candidatus Methanophagales archaeon] diamond 162 42.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Candidatus Methanophagales     Candidatus Methanophagales archaeon
28544754 28544754 PRJNA290839_P_NODE_287_length_498_cov_1.628235_g266_i0 PRJNA290839 287 498 1.628235 8.1086103 root 1 Root_unresolved Root_unresolved 108 5.28e-24   NR OPX78749.1 1811685 g266 i0 40.2 4.67469879518072 164 89 95.8 5 495 19 923 1082 OPX78749.1 MAG: HYR domain protein [Methanosaeta sp. PtaB.Bin039] diamond 2328 108 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanosaeta sp. PtaB.Bin039

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;