RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA289590" and tax_superkingdom = "Viruses"

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tax_phylum 2

tax_kingdom 2

tax_superkingdom 1

  • Viruses · 9 ✖

bioproject 1

  • PRJNA289590 · 9 ✖

analysis 1

  • diamond · 9 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26775486 26775486 PRJNA289590_P_NODE_20301_length_197_cov_2.790541_g20077_i0 PRJNA289590 20301 197 2.790541 5.49736577 Viruses 10239 Viruses Viruses 47.8 2.3e-5   NR QLI49465.1 2743937 g20077 i0 56.5 1.34010152284264 46 20 70.1 0 1 138 13 58 QLI49465.1 hypothetical protein vBPaeMUSP18_64 [Pseudomonas phage vB_PaeM_USP_18] diamond 264 47.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Pseudomonas phage vB_PaeM_USP_18
26852925 26852925 PRJNA289590_P_NODE_6161_length_390_cov_1.454545_g5937_i0 PRJNA289590 6161 390 1.454545 5.6727255 Pseudoalteromonas phage pYD6-A 754052 Viruses Viruses 79.7 1.83e-14   NR YP_007674256.1 754052 g5937 i0 47.3 0.992307692307692 129 62 97.7 3 8 388 293 417 YP_007674256.1 hypothetical protein PYDG_00047 [Pseudoalteromonas phage pYD6-A] diamond 387 79.7 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Schitoviridae Matsuvirus Matsuvirus pYD6A
27453615 27453615 PRJNA289590_P_NODE_29763_length_164_cov_0.904348_g29539_i0 PRJNA289590 29763 164 0.904348 1.48313072 Apocheima cinerarium nucleopolyhedrovirus 307461 Viruses Viruses 74.7 8.42e-16   NR YP_006607868.1 307461 g29539 i0 75.9 13.8292682926829 54 12 98.8 1 3 164 22 74 YP_006607868.1 AciNPV99 [Apocheima cinerarium nucleopolyhedrovirus] diamond 2268 74.7 1 Viruses       Naldaviricetes Lefavirales Baculoviridae Alphabaculovirus Apocheima cinerarium nucleopolyhedrovirus
28084784 28084784 PRJNA289590_P_NODE_19125_length_204_cov_1.974194_g18901_i0 PRJNA289590 19125 204 1.974194 4.02735576 Vibrio phage D148 3104901 Viruses Viruses 42.7 0.0184   NR CAM0089275.1 3104901 g18901 i0 45.8 0.867647058823529 59 28 83.8 2 11 181 87 143 CAM0089275.1 Gp2.5-like ssDNA binding protein and ssDNA anneal ing protein [Vibrio phage D148] diamond 177 42.7 1 Viruses               Vibrio phage D148
28084797 28084797 PRJNA289590_P_NODE_26085_length_169_cov_0.866667_g25861_i0 PRJNA289590 26085 169 0.866667 1.46466723 Vibrio phage D69 3105312 Viruses Viruses 47 3.13e-4   NR CAL9985992.1 3105312 g25861 i0 50 1.02958579881657 58 26 97.6 1 1 165 59 116 CAL9985992.1 hypothetical protein VPHD69_0280 [Vibrio phage D69] diamond 174 47 1 Viruses               Vibrio phage D69
31622736 31622736 PRJNA289590_P_NODE_13496_length_248_cov_1.045226_g13272_i0 PRJNA289590 13496 248 1.045226 2.59216048 Vibrio phage D69 3105312 Viruses Viruses 81.6 5.75e-17   NR CAL9985992.1 3105312 g13272 i0 47.8 0.834677419354839 69 36 83.5 0 246 40 118 186 CAL9985992.1 hypothetical protein VPHD69_0280 [Vibrio phage D69] diamond 207 81.6 1 Viruses               Vibrio phage D69
31875685 31875685 PRJNA289590_P_NODE_21117_length_193_cov_1.270833_g20893_i0 PRJNA289590 21117 193 1.270833 2.45270769 Inoviridae sp. 2219103 Viruses Viruses 50.1 5e-5   NR XOF06140.1 2219103 g20893 i0 56.6 0.823834196891192 53 16 71.5 2 139 2 83 135 XOF06140.1 MAG: hypothetical protein [Inoviridae sp.] diamond 159 50.1 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
32603412 32603412 PRJNA289590_P_NODE_10820_length_280_cov_0.982684_g10596_i0 PRJNA289590 10820 280 0.982684 2.7515152 Nitrincola phage 1M3-16 1472912 Viruses Viruses 63.2 3.3e-9   NR YP_009037253.1 1472912 g10596 i0 42.6 0.728571428571429 68 39 72.9 0 75 278 244 311 YP_009037253.1 ATP-dependent DNA ligase [Nitrincola phage 1M3-16] diamond 204 63.2 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Nitrincola phage 1M3-16
32729373 32729373 PRJNA289590_P_NODE_17180_length_217_cov_0.928571_g16956_i0 PRJNA289590 17180 217 0.928571 2.01499907 Vibrio phage D181 3104936 Viruses Viruses 87.4 4.13e-18   NR CAM0042940.1 3104936 g16956 i0 62.7 0.815668202764977 59 22 81.6 0 39 215 132 190 CAM0042940.1 hypothetical protein VPHD181_0277 [Vibrio phage D181] diamond 177 87.4 1 Viruses               Vibrio phage D181

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;