RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA289590" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA289590 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11850903 11850903 PRJNA289590_P_NODE_10050_length_292_cov_1.497942_g9826_i0 PRJNA289590 10050 292 1.497942 4.37399064 Fungi 4751 Fungi Fungi 146 2.66e-41   NR KAH9993630.1 517384 g9826 i0 73 7.97260273972603 89 24 91.4 0 290 24 23 111 KAH9993630.1 guanine nucleotide binding protein beta subunit [Russula vinacea] diamond 2328 147 0.993197278911565 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Russulales Russulaceae Russula Russula vinacea
32729384 32729384 PRJNA289590_P_NODE_26120_length_169_cov_0.866667_g25896_i0 PRJNA289590 26120 169 0.866667 1.46466723 Fomitiporia mediterranea MF3/22 694068 Fungi Fungi 75.1 5.03e-14   NR XP_007265867.1 694068 g25896 i0 79.6 0.869822485207101 49 8 83.4 1 143 3 44 92 XP_007265867.1 uncharacterized protein FOMMEDRAFT_167489 [Fomitiporia mediterranea MF3/22] diamond 147 75.1 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Hymenochaetales Hymenochaetaceae Fomitiporia Fomitiporia mediterranea

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;