RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA287283" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA287283 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29428354 29428354 PRJNA287283_P_NODE_8589_length_183_cov_0.861538_g8365_i0 PRJNA287283 8589 183 0.861538 1.57661454 Wallemia 148959 Fungi Fungi 41.6 0.045   NR TIA77982.1 245174 g8365 i0 41.4 1.90163934426229 58 33 95.1 1 183 10 328 384 TIA77982.1 hypothetical protein E3P98_04025 [Wallemia ichthyophaga] diamond 348 41.6 1 Eukaryota Opisthokonta Fungi Basidiomycota Wallemiomycetes Wallemiales Wallemiaceae Wallemia Wallemia ichthyophaga
29775788 29775788 PRJNA287283_P_NODE_6091_length_234_cov_0.977901_g5867_i0 PRJNA287283 6091 234 0.977901 2.28828834 Agaricomycetes 155619 Fungi Fungi 114 1.6e-27   NR KAH9850839.1 5632 g5867 i0 74 2.96153846153846 77 18 98.7 1 2 232 275 349 KAH9850839.1 glycosyl hydrolase family 7-domain-containing protein [Lenzites betulinus] diamond 693 115 0.991304347826087 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Polyporaceae Lenzites Lenzites betulinus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;