contig_metadata
7 rows where analysis = "diamond", bioproject = "PRJNA287283" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27358794 | 27358794 | PRJNA287283_P_NODE_3843_length_323_cov_4.848148_g3619_i0 | PRJNA287283 | 3843 | 323 | 4.848148 | 15.65951804 | Exiguobacterium aurantiacum | 33987 | Bacteria | Bacteria | 47.4 | 1.52e-4 | NR | WP_233005565.1 | 33987 | g3619 | i0 | 88.9 | 0.25077399380805 | 27 | 3 | 25.1 | 0 | 112 | 32 | 30 | 56 | WP_233005565.1 hypothetical protein, partial [Exiguobacterium aurantiacum] | diamond | 81 | 47.4 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Exiguobacterium | Exiguobacterium aurantiacum | |||
| 27390387 | 27390387 | PRJNA287283_P_NODE_7363_length_201_cov_0.945946_g7139_i0 | PRJNA287283 | 7363 | 201 | 0.945946 | 1.90135146 | Listeria monocytogenes | 1639 | Bacteria | Bacteria | 54.7 | 4.75e-8 | NR | WP_369698196.1 | 1639 | g7139 | i0 | 100 | 0.343283582089552 | 23 | 0 | 34.3 | 0 | 49 | 117 | 38 | 60 | WP_369698196.1 hypothetical protein, partial [Listeria monocytogenes] | diamond | 69 | 54.7 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Listeriaceae | Listeria | Listeria monocytogenes | ||
| 28400605 | 28400605 | PRJNA287283_P_NODE_7786_length_193_cov_0.864286_g7562_i0 | PRJNA287283 | 7786 | 193 | 0.864286 | 1.66807198 | Listeria monocytogenes | 1639 | Bacteria | Bacteria | 53.1 | 1.86e-7 | NR | WP_369698293.1 | 1639 | g7562 | i0 | 82.4 | 1.50777202072539 | 34 | 2 | 46.6 | 1 | 191 | 102 | 31 | 64 | WP_369698293.1 hypothetical protein [Listeria monocytogenes] | diamond | 291 | 53.5 | 0.992523364485981 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Listeriaceae | Listeria | Listeria monocytogenes | ||
| 29252840 | 29252840 | PRJNA287283_P_NODE_9349_length_179_cov_0.888889_g9125_i0 | PRJNA287283 | 9349 | 179 | 0.888889 | 1.59111131 | Streptococcus mitis | 28037 | Bacteria | Bacteria | 120 | 4.17e-31 | NR | WP_414309482.1 | 28037 | g9125 | i0 | 100 | 0.988826815642458 | 59 | 0 | 98.9 | 0 | 178 | 2 | 125 | 183 | WP_414309482.1 AAA family ATPase [Streptococcus mitis] | diamond | 177 | 120 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus mitis | ||
| 29284474 | 29284474 | PRJNA287283_P_NODE_7229_length_204_cov_0.920530_g7005_i0 | PRJNA287283 | 7229 | 204 | 0.92053 | 1.8778812 | Listeria monocytogenes | 1639 | Bacteria | Bacteria | 67.4 | 4.16e-12 | NR | WP_369698292.1 | 1639 | g7005 | i0 | 62.7 | 0.985294117647059 | 67 | 23 | 98.5 | 1 | 2 | 202 | 77 | 141 | WP_369698292.1 hypothetical protein, partial [Listeria monocytogenes] | diamond | 201 | 67.4 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Listeriaceae | Listeria | Listeria monocytogenes | ||
| 31622724 | 31622724 | PRJNA287283_P_NODE_7276_length_203_cov_0.773333_g7052_i0 | PRJNA287283 | 7276 | 203 | 0.773333 | 1.56986599 | Listeria monocytogenes | 1639 | Bacteria | Bacteria | 127 | 1.7399999999999997e-35 | NR | WP_369698296.1 | 1639 | g7052 | i0 | 100 | 3.96059113300493 | 67 | 0 | 99 | 0 | 2 | 202 | 62 | 128 | WP_369698296.1 RNA-directed DNA polymerase, partial [Listeria monocytogenes] | diamond | 804 | 127 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Listeriaceae | Listeria | Listeria monocytogenes | ||
| 32445600 | 32445600 | PRJNA287283_P_NODE_3279_length_353_cov_0.956667_g3055_i0 | PRJNA287283 | 3279 | 353 | 0.956667 | 3.37703451 | Listeria monocytogenes | 1639 | Bacteria | Bacteria | 67.8 | 8.23e-12 | NR | WP_369698193.1 | 1639 | g3055 | i0 | 91.7 | 0.305949008498584 | 36 | 2 | 30.6 | 1 | 215 | 322 | 1 | 35 | WP_369698193.1 hypothetical protein, partial [Listeria monocytogenes] | diamond | 108 | 67.8 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Listeriaceae | Listeria | Listeria monocytogenes |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;