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contig_metadata

13 rows where analysis = "diamond", bioproject = "PRJNA287283" and tax_kingdom = "Viridiplantae"

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tax_phylum 2

tax_clade 2

tax_superkingdom 1

tax_kingdom 1

  • Viridiplantae · 13 ✖

bioproject 1

  • PRJNA287283 · 13 ✖

analysis 1

  • diamond · 13 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26757496 26757496 PRJNA287283_P_NODE_7861_length_191_cov_1.623188_g7637_i0 PRJNA287283 7861 191 1.623188 3.10028908 Cymbomonas tetramitiformis 36881 Plants Plants 50.1 4.8e-5   NR KAK3260788.1 36881 g7637 i0 75.9 0.910994764397906 29 7 45.5 0 190 104 396 424 KAK3260788.1 hypothetical protein CYMTET_30267 [Cymbomonas tetramitiformis] diamond 174 50.1 1 Eukaryota   Viridiplantae Chlorophyta Pyramimonadophyceae Pyramimonadales Pyramimonadaceae Cymbomonas Cymbomonas tetramitiformis
28148151 28148151 PRJNA287283_P_NODE_8925_length_181_cov_0.875000_g8701_i0 PRJNA287283 8925 181 0.875 1.58375 Bryopsis sp. KO-2 3115439 Plants Plants 48.1 2.04e-4   NR GMH39996.1 3041901 g8701 i0 55 0.662983425414365 40 18 66.3 0 124 5 4 43 GMH39996.1 hypothetical protein BSKO_07900 [Bryopsis sp. KO-2023] diamond 120 48.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Bryopsidaceae Bryopsis Bryopsis sp. KO-2023
28305852 28305852 PRJNA287283_P_NODE_6086_length_234_cov_1.187845_g5862_i0 PRJNA287283 6086 234 1.187845 2.7795573 Rhododendron williamsianum 262921 Plants Plants 43.5 0.011   NR KAE9449397.1 262921 g5862 i0 36.4 2.43589743589744 66 38 84.6 3 32 229 83 144 KAE9449397.1 hypothetical protein C3L33_18702, partial [Rhododendron williamsianum] diamond 570 43.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Ericales Ericaceae Rhododendron Rhododendron williamsianum
28368932 28368932 PRJNA287283_P_NODE_4306_length_301_cov_2.592742_g4082_i0 PRJNA287283 4306 301 2.592742 7.80415342 Chlamydomonas eustigma 1157962 Plants Plants 58.5 1.94e-7   NR GAX78925.1 1157962 g4082 i0 49.1 0.568106312292359 57 26 53.8 1 138 299 170 226 GAX78925.1 hypothetical protein CEUSTIGMA_g6364.t1 [Chlamydomonas eustigma] diamond 171 58.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas eustigma
28734045 28734045 PRJNA287283_P_NODE_8747_length_182_cov_0.868217_g8523_i0 PRJNA287283 8747 182 0.868217 1.58015494 Streptophyta 35493 Plants Plants 99.4 1.46e-22   NR XP_024402545.1 3218 g8523 i0 78 15.5604395604396 59 13 97.3 0 181 5 362 420 XP_024402545.1 fructose-bisphosphate aldolase 1, chloroplastic-like [Physcomitrium patens] diamond 2832 100 0.994 Eukaryota Embryophyta Viridiplantae Streptophyta Bryopsida Funariales Funariaceae Physcomitrium Physcomitrium patens
29758167 29758167 PRJNA287283_P_NODE_1491_length_577_cov_1.444656_g1275_i0 PRJNA287283 1491 577 1.444656 8.33566512 Chlamydomonas eustigma 1157962 Plants Plants 63.2 6.76e-8   NR GAX78925.1 1157962 g1275 i0 27.7 0.805892547660312 155 92 75.4 5 575 141 306 450 GAX78925.1 hypothetical protein CEUSTIGMA_g6364.t1 [Chlamydomonas eustigma] diamond 465 63.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas eustigma
29979368 29979368 PRJNA287283_P_NODE_5971_length_237_cov_1.092391_g5747_i0 PRJNA287283 5971 237 1.092391 2.58896667 Melia azedarach 155640 Plants Plants 43.5 0.0176   NR KAJ4713975.1 155640 g5747 i0 32.2 1.10126582278481 87 47 98.7 3 236 3 165 248 KAJ4713975.1 F-box protein [Melia azedarach] diamond 261 43.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Sapindales Meliaceae Melia Melia azedarach
30105631 30105631 PRJNA287283_P_NODE_1492_length_577_cov_1.179389_g1276_i0 PRJNA287283 1492 577 1.179389 6.80507453 Chlamydomonas eustigma 1157962 Plants Plants 68.2 1.28e-9   NR GAX78925.1 1157962 g1276 i0 28.8 0.811091854419411 156 89 75.4 6 3 437 306 450 GAX78925.1 hypothetical protein CEUSTIGMA_g6364.t1 [Chlamydomonas eustigma] diamond 468 68.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas eustigma
30579426 30579426 PRJNA287283_P_NODE_10193_length_176_cov_0.910569_g9969_i0 PRJNA287283 10193 176 0.910569 1.60260144 Coccomyxa sp. Obi 2315456 Plants Plants 70.5 2.48e-12   NR BDA40807.1 2315456 g9969 i0 64.8 0.920454545454545 54 19 92 0 14 175 413 466 BDA40807.1 Vitamin B12 transport ATP-binding protein BacA [Coccomyxa sp. Obi] diamond 162 70.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa sp. Obi
31482578 31482578 PRJNA287283_P_NODE_6716_length_216_cov_1.018405_g6492_i0 PRJNA287283 6716 216 1.018405 2.1997548 Closterium 34145 Plants Plants 50.1 5.81e-5   NR CAI5488445.1 2996811 g6492 i0 51.2 2.38888888888889 43 21 59.7 0 86 214 83 125 CAI5488445.1 unnamed protein product [Closterium sp. Naga37s-1] diamond 516 50.4 0.994047619047619 Eukaryota   Viridiplantae Streptophyta Zygnematophyceae Desmidiales Closteriaceae Closterium Closterium sp. Naga37s-1
31861692 31861692 PRJNA287283_P_NODE_8777_length_182_cov_0.868217_g8553_i0 PRJNA287283 8777 182 0.868217 1.58015494 Eukaryota 2759 Plants Plants 48.9 5.01e-5   NR XP_058729145.1 3911 g8553 i0 39 1.94505494505495 59 35 97.3 1 182 6 16 73 XP_058729145.1 SKP1-like protein 1A isoform X1 [Vicia villosa] diamond 354 49.3 0.991886409736308 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Vicia Vicia villosa
32020063 32020063 PRJNA287283_P_NODE_3838_length_324_cov_1.214022_g3614_i0 PRJNA287283 3838 324 1.214022 3.93343128 Eukaryota 2759 Plants Plants 123 2.69e-30   NR KAJ8622128.1 3435 g3614 i0 58 26.7037037037037 100 42 92.6 0 19 318 65 164 KAJ8622128.1 hypothetical protein MRB53_030657 [Persea americana] diamond 8652 124 0.991935483870968 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Laurales Lauraceae Persea Persea americana
32603407 32603407 PRJNA287283_P_NODE_2640_length_402_cov_1.796562_g2416_i0 PRJNA287283 2640 402 1.796562 7.22217924 Lactuca saligna 75948 Plants Plants 45.4 0.0231   NR CAI9278555.1 75948 g2416 i0 33.7 0.686567164179104 92 60 68.7 1 55 330 92 182 CAI9278555.1 unnamed protein product [Lactuca saligna] diamond 276 45.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Lactuca Lactuca saligna

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;