RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA287283" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 4 ✖

bioproject 1

  • PRJNA287283 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1646942 1646942 PRJNA287283_P_NODE_1262_length_633_cov_1.846552_g1056_i0 PRJNA287283 1262 633 1.846552 11.68867416 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 224 9.38e-64   NR AVM87439.1 3063761 g1056 i0 51.9 1.01421800947867 214 96 98.1 1 632 12 948 1161 AVM87439.1 polyprotein [Wuhan sharpbelly picornavirus 1] diamond 642 224 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Danio blood picornavirus/Zebrafish picornavirus 2
5475606 5475606 PRJNA287283_P_NODE_5785_length_242_cov_1.439153_g5561_i0 PRJNA287283 5785 242 1.439153 3.48275026 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 92.8 8.98e-20   NR AVM87439.1 3063761 g5561 i0 59.3 1.00413223140496 81 30 96.7 1 8 241 440 520 AVM87439.1 polyprotein [Wuhan sharpbelly picornavirus 1] diamond 243 92.8 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Danio blood picornavirus/Zebrafish picornavirus 2
14401167 14401167 PRJNA287283_P_NODE_3372_length_348_cov_1.067797_g3148_i0 PRJNA287283 3372 348 1.067797 3.71593356 African cichlid piscichuvirus 3065075 Viruses Viruses 90.5 2.44e-18   NR WLN26256.1 3065075 g3148 i0 51.7 0.75 87 42 75 0 64 324 229 315 WLN26256.1 MAG: L protein, partial [African cichlid piscichuvirus] diamond 261 90.5 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Piscichuvirus African cichlid piscichuvirus
28179326 28179326 PRJNA287283_P_NODE_5266_length_260_cov_1.251208_g5042_i0 PRJNA287283 5266 260 1.251208 3.2531408 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 105 5.4499999999999996e-24   NR AVM87439.1 3063761 g5042 i0 51.2 0.992307692307692 86 42 99.2 0 260 3 299 384 AVM87439.1 polyprotein [Wuhan sharpbelly picornavirus 1] diamond 258 105 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Danio blood picornavirus/Zebrafish picornavirus 2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;