contig_metadata
16 rows where analysis = "diamond", bioproject = "PRJNA287283" and tax_kingdom = "Bacillati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26821163 | 26821163 | PRJNA287283_P_NODE_8441_length_183_cov_0.861538_g8217_i0 | PRJNA287283 | 8441 | 183 | 0.861538 | 1.57661454 | Rhodococcus sp. EPR-157 | 1813677 | Bacteria | Bacteria | 120 | 4.03e-32 | NR | WP_068367966.1 | 1813677 | g8217 | i0 | 98.4 | 3 | 61 | 1 | 100 | 0 | 183 | 1 | 24 | 84 | WP_068367966.1 HpcH/HpaI aldolase/citrate lyase family protein, partial [Rhodococcus sp. EPR-157] | diamond | 549 | 120 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Nocardiaceae | Rhodococcus | Rhodococcus sp. EPR-157 | ||
| 27232172 | 27232172 | PRJNA287283_P_NODE_8743_length_182_cov_0.868217_g8519_i0 | PRJNA287283 | 8743 | 182 | 0.868217 | 1.58015494 | Anaerolineae bacterium | 2052143 | Bacteria | Bacteria | 87.8 | 2.16e-18 | NR | HLF25218.1 | 2052143 | g8519 | i0 | 68.4 | 0.93956043956044 | 57 | 18 | 94 | 0 | 182 | 12 | 233 | 289 | HLF25218.1 sialidase family protein [Anaerolineae bacterium] | diamond | 171 | 87.8 | 1 | Bacteria | Bacillati | Chloroflexota | Anaerolineae | Anaerolineae bacterium | |||||
| 27358794 | 27358794 | PRJNA287283_P_NODE_3843_length_323_cov_4.848148_g3619_i0 | PRJNA287283 | 3843 | 323 | 4.848148 | 15.65951804 | Exiguobacterium aurantiacum | 33987 | Bacteria | Bacteria | 47.4 | 1.52e-4 | NR | WP_233005565.1 | 33987 | g3619 | i0 | 88.9 | 0.25077399380805 | 27 | 3 | 25.1 | 0 | 112 | 32 | 30 | 56 | WP_233005565.1 hypothetical protein, partial [Exiguobacterium aurantiacum] | diamond | 81 | 47.4 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Exiguobacterium | Exiguobacterium aurantiacum | |||
| 27390386 | 27390386 | PRJNA287283_P_NODE_10403_length_175_cov_0.918033_g10179_i0 | PRJNA287283 | 10403 | 175 | 0.918033 | 1.60655775 | Lawsonella | 1847725 | Bacteria | Bacteria | 113 | 5.62e-28 | NR | WP_290598508.1 | 1847725 | g10179 | i0 | 100 | 0.977142857142857 | 57 | 0 | 97.7 | 0 | 173 | 3 | 19 | 75 | WP_290598508.1 MULTISPECIES: MinD/ParA family ATP-binding protein [Lawsonella] | diamond | 171 | 113 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Lawsonellaceae | Lawsonella | |||
| 27390387 | 27390387 | PRJNA287283_P_NODE_7363_length_201_cov_0.945946_g7139_i0 | PRJNA287283 | 7363 | 201 | 0.945946 | 1.90135146 | Listeria monocytogenes | 1639 | Bacteria | Bacteria | 54.7 | 4.75e-8 | NR | WP_369698196.1 | 1639 | g7139 | i0 | 100 | 0.343283582089552 | 23 | 0 | 34.3 | 0 | 49 | 117 | 38 | 60 | WP_369698196.1 hypothetical protein, partial [Listeria monocytogenes] | diamond | 69 | 54.7 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Listeriaceae | Listeria | Listeria monocytogenes | ||
| 28260188 | 28260188 | PRJNA287283_P_NODE_7666_length_195_cov_0.964789_g7442_i0 | PRJNA287283 | 7666 | 195 | 0.964789 | 1.88133855 | root | 1 | Root_unresolved | Root_unresolved | 40.4 | 0.0348 | NR | WP_146844862.1 | 311234 | g7442 | i0 | 50 | 1.38461538461538 | 38 | 19 | 58.5 | 0 | 23 | 136 | 30 | 67 | WP_146844862.1 hypothetical protein [Cellulomonas terrae] | diamond | 270 | 40.4 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Cellulomonadaceae | Cellulomonas | Cellulomonas terrae | ||
| 28400605 | 28400605 | PRJNA287283_P_NODE_7786_length_193_cov_0.864286_g7562_i0 | PRJNA287283 | 7786 | 193 | 0.864286 | 1.66807198 | Listeria monocytogenes | 1639 | Bacteria | Bacteria | 53.1 | 1.86e-7 | NR | WP_369698293.1 | 1639 | g7562 | i0 | 82.4 | 1.50777202072539 | 34 | 2 | 46.6 | 1 | 191 | 102 | 31 | 64 | WP_369698293.1 hypothetical protein [Listeria monocytogenes] | diamond | 291 | 53.5 | 0.992523364485981 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Listeriaceae | Listeria | Listeria monocytogenes | ||
| 29000860 | 29000860 | PRJNA287283_P_NODE_6088_length_234_cov_1.138122_g5864_i0 | PRJNA287283 | 6088 | 234 | 1.138122 | 2.66320548 | Chloroflexota bacterium | 2026724 | Bacteria | Bacteria | 42.4 | 0.0442 | NR | MBI4498881.1 | 2026724 | g5864 | i0 | 41 | 0.782051282051282 | 61 | 30 | 78.2 | 1 | 38 | 220 | 374 | 428 | MBI4498881.1 ammonium transporter [Chloroflexota bacterium] | diamond | 183 | 42.4 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexota bacterium | ||||||
| 29252840 | 29252840 | PRJNA287283_P_NODE_9349_length_179_cov_0.888889_g9125_i0 | PRJNA287283 | 9349 | 179 | 0.888889 | 1.59111131 | Streptococcus mitis | 28037 | Bacteria | Bacteria | 120 | 4.17e-31 | NR | WP_414309482.1 | 28037 | g9125 | i0 | 100 | 0.988826815642458 | 59 | 0 | 98.9 | 0 | 178 | 2 | 125 | 183 | WP_414309482.1 AAA family ATPase [Streptococcus mitis] | diamond | 177 | 120 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus mitis | ||
| 29284474 | 29284474 | PRJNA287283_P_NODE_7229_length_204_cov_0.920530_g7005_i0 | PRJNA287283 | 7229 | 204 | 0.92053 | 1.8778812 | Listeria monocytogenes | 1639 | Bacteria | Bacteria | 67.4 | 4.16e-12 | NR | WP_369698292.1 | 1639 | g7005 | i0 | 62.7 | 0.985294117647059 | 67 | 23 | 98.5 | 1 | 2 | 202 | 77 | 141 | WP_369698292.1 hypothetical protein, partial [Listeria monocytogenes] | diamond | 201 | 67.4 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Listeriaceae | Listeria | Listeria monocytogenes | ||
| 29821181 | 29821181 | PRJNA287283_P_NODE_9891_length_177_cov_0.903226_g9667_i0 | PRJNA287283 | 9891 | 177 | 0.903226 | 1.59871002 | Sediminivirga luteola | 1774748 | Bacteria | Bacteria | 87.4 | 1.99e-18 | NR | WP_229745146.1 | 1774748 | g9667 | i0 | 75 | 0.949152542372881 | 56 | 14 | 94.9 | 0 | 9 | 176 | 211 | 266 | WP_229745146.1 exonuclease domain-containing protein [Sediminivirga luteola] | diamond | 168 | 87.4 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Brevibacteriaceae | Sediminivirga | Sediminivirga luteola | ||
| 30471125 | 30471125 | PRJNA287283_P_NODE_5273_length_260_cov_0.864734_g5049_i0 | PRJNA287283 | 5273 | 260 | 0.864734 | 2.2483084 | PVC group | 1783257 | Bacteria | Bacteria | 42.7 | 0.0236 | NR | WP_376810015.1 | 1337874 | g5049 | i0 | 44.1 | 0.992307692307692 | 59 | 26 | 66.9 | 3 | 67 | 240 | 62 | 114 | WP_376810015.1 hypothetical protein [Catellatospora aurea] | diamond | 258 | 43.1 | 0.990719257540603 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micromonosporales | Micromonosporaceae | Catellatospora | Catellatospora aurea | ||
| 31622724 | 31622724 | PRJNA287283_P_NODE_7276_length_203_cov_0.773333_g7052_i0 | PRJNA287283 | 7276 | 203 | 0.773333 | 1.56986599 | Listeria monocytogenes | 1639 | Bacteria | Bacteria | 127 | 1.7399999999999997e-35 | NR | WP_369698296.1 | 1639 | g7052 | i0 | 100 | 3.96059113300493 | 67 | 0 | 99 | 0 | 2 | 202 | 62 | 128 | WP_369698296.1 RNA-directed DNA polymerase, partial [Listeria monocytogenes] | diamond | 804 | 127 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Listeriaceae | Listeria | Listeria monocytogenes | ||
| 31907434 | 31907434 | PRJNA287283_P_NODE_4797_length_279_cov_1.451327_g4573_i0 | PRJNA287283 | 4797 | 279 | 1.451327 | 4.04920233 | Salinibacterium hongtaonis | 2079791 | Bacteria | Bacteria | 43.5 | 0.0295 | NR | WP_108518238.1 | 2079791 | g4573 | i0 | 51.1 | 0.483870967741935 | 45 | 20 | 46.2 | 2 | 187 | 59 | 205 | 249 | WP_108518238.1 MmgE/PrpD family protein [Salinibacterium hongtaonis] | diamond | 135 | 43.5 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Homoserinimonas | Homoserinimonas hongtaonis | ||
| 32097257 | 32097257 | PRJNA287283_P_NODE_9138_length_180_cov_0.881890_g8914_i0 | PRJNA287283 | 9138 | 180 | 0.88189 | 1.587402 | Acidimicrobiia bacterium | 2080302 | Bacteria | Bacteria | 42 | 0.03 | NR | HZJ48322.1 | 2080302 | g8914 | i0 | 41.2 | 0.85 | 51 | 21 | 70 | 1 | 48 | 173 | 335 | 385 | HZJ48322.1 isoamylase [Acidimicrobiia bacterium] | diamond | 153 | 42 | 1 | Bacteria | Bacillati | Actinomycetota | Acidimicrobiia | Acidimicrobiia bacterium | |||||
| 32445600 | 32445600 | PRJNA287283_P_NODE_3279_length_353_cov_0.956667_g3055_i0 | PRJNA287283 | 3279 | 353 | 0.956667 | 3.37703451 | Listeria monocytogenes | 1639 | Bacteria | Bacteria | 67.8 | 8.23e-12 | NR | WP_369698193.1 | 1639 | g3055 | i0 | 91.7 | 0.305949008498584 | 36 | 2 | 30.6 | 1 | 215 | 322 | 1 | 35 | WP_369698193.1 hypothetical protein, partial [Listeria monocytogenes] | diamond | 108 | 67.8 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Listeriaceae | Listeria | Listeria monocytogenes |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;