RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA285816" and tax_superkingdom = "Viruses"

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tax_kingdom 2

tax_clade 2

tax_superkingdom 1

  • Viruses · 9 ✖

bioproject 1

  • PRJNA285816 · 9 ✖

analysis 1

  • diamond · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27863722 27863722 PRJNA285816_S_NODE_18645_length_185_cov_1.147059_g18543_i0 PRJNA285816 18645 185 1.147059 2.12205915 Yasminevirus sp. GU-2 3060817 Viruses Viruses 74.7 9.89e-16   NR VBB17698.1 2420051 g18543 i0 61.5 1.68648648648649 52 20 84.3 0 30 185 32 83 VBB17698.1 Acyl-CoA-binding protein [Yasminevirus sp. GU-2018] diamond 312 74.7 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Yasminevirus Yasminevirus saudimassiliense
28021857 28021857 PRJNA285816_S_NODE_20765_length_178_cov_1.209302_g20663_i0 PRJNA285816 20765 178 1.209302 2.15255756 Sonamyl virus 3131590 Viruses Viruses 74.3 1.14e-13   NR WZH61631.1 3131590 g20663 i0 59.6 0.960674157303371 57 23 96.1 0 1 171 515 571 WZH61631.1 MAG: RNA-dependent RNA polymerase [Sonamyl virus] diamond 171 74.3 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes       Sonamyl virus
28842466 28842466 PRJNA285816_S_NODE_25228_length_167_cov_1.381356_g25126_i0 PRJNA285816 25228 167 1.381356 2.30686452 Clandestinovirus 2831644 Viruses Viruses 44.7 0.00276   NR QYA18491.1 2831644 g25126 i0 52.5 0.718562874251497 40 19 71.9 0 167 48 39 78 QYA18491.1 deoxyguanosine kinase mitochondrial precursor [Clandestinovirus] diamond 120 44.7 1 Viruses               Clandestinovirus
28969013 28969013 PRJNA285816_S_NODE_28_length_3767_cov_10.714094_g27_i0 PRJNA285816 28 3767 10.714094 403.59992098 Orpheovirus IHUMI-LCC2 2023057 Viruses Viruses 160 9.76e-36   NR YP_009449258.1 2023057 g27 i0 28.2 1.27820546854261 760 415 55.8 32 237 2339 13 700 YP_009449258.1 Domain of unknown function (DUF4114) [Orpheovirus IHUMI-LCC2] diamond 4815 160 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Orpheoviridae Alphaorpheovirus Alphaorpheovirus massiliense
30453528 30453528 PRJNA285816_S_NODE_25893_length_166_cov_1.777778_g25791_i0 PRJNA285816 25893 166 1.777778 2.95111148 Pithovirus LCPAC 2506585 Viruses Viruses 49.7 4.72e-5   NR QBK89686.1 2506585 g25791 i0 44 0.903614457831325 50 21 90.4 1 8 157 283 325 QBK89686.1 MAG: protein of unknown function DUF3432 [Pithovirus LCPAC001] diamond 150 49.7 1 Viruses Pithoviruses             Pithovirus LCPAC001
31338023 31338023 PRJNA285816_S_NODE_4456_length_323_cov_2.313869_g4354_i0 PRJNA285816 4456 323 2.313869 7.47379687 Orpheovirus IHUMI-LCC2 2023057 Viruses Viruses 64.3 2.6e-9   NR YP_009449258.1 2023057 g4354 i0 39.1 3.72445820433437 110 55 97.5 4 4 318 81 183 YP_009449258.1 Domain of unknown function (DUF4114) [Orpheovirus IHUMI-LCC2] diamond 1203 64.3 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Orpheoviridae Alphaorpheovirus Alphaorpheovirus massiliense
32034062 32034062 PRJNA285816_S_NODE_838_length_686_cov_3.149137_g772_i0 PRJNA285816 838 686 3.149137 21.60307982 Bamboo mosaic virus satellite RNA 190811 Viruses Viruses 107 1.28e-25   NR AJO26629.1 190811 g772 i0 51.1 0.787172011661808 90 44 39.4 0 499 230 25 114 AJO26629.1 P20 protein, partial [Bamboo mosaic virus satellite RNA] diamond 540 107 1 Viruses RNA satellites             Bamboo mosaic virus satellite RNA
32603384 32603384 PRJNA285816_S_NODE_11520_length_219_cov_1.488235_g11418_i0 PRJNA285816 11520 219 1.488235 3.25923465 Orpheovirus IHUMI-LCC2 2023057 Viruses Viruses 55.8 6.51e-7   NR YP_009449258.1 2023057 g11418 i0 48.5 1.9041095890411 66 27 89 2 14 208 47 106 YP_009449258.1 Domain of unknown function (DUF4114) [Orpheovirus IHUMI-LCC2] diamond 417 55.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Orpheoviridae Alphaorpheovirus Alphaorpheovirus massiliense
32792073 32792073 PRJNA285816_S_NODE_3560_length_358_cov_4.181230_g3458_i0 PRJNA285816 3560 358 4.18123 14.9688034 Klosneuvirus KNV1 1977640 Viruses Viruses 84.7 2.25e-16   NR ARF12058.1 1977640 g3458 i0 52.6 0.653631284916201 78 35 65.4 1 356 123 387 462 ARF12058.1 aminotransferase class-III [Klosneuvirus KNV1] diamond 234 84.7 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Klosneuvirus Klosneuvirus KNV1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;