RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA285816" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA285816 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28891638 28891638 PRJNA285816_S_NODE_18388_length_186_cov_1.131387_g18286_i0 PRJNA285816 18388 186 1.131387 2.10437982 Eukaryota 2759 Fungi Fungi 50.1 8.41e-6   NR KAI5148571.1 1912989 g18286 i0 51.3 2.7258064516129 39 19 62.9 0 186 70 34 72 KAI5148571.1 hypothetical protein ENBRE01_0409 [Enteropsectra breve] diamond 507 50.1 1 Eukaryota Opisthokonta Fungi Microsporidia       Enteropsectra Enteropsectra breve
30895788 30895788 PRJNA285816_S_NODE_5134_length_304_cov_1.223529_g5032_i0 PRJNA285816 5134 304 1.223529 3.71952816 Dictyocoela muelleri 279532 Fungi Fungi 89.4 3.2e-18   NR KAG0440048.1 279532 g5032 i0 50 1.49013157894737 74 36 73 1 222 1 409 481 KAG0440048.1 Replication protein A 70 kDa DNA-binding subunit [Dictyocoela muelleri] diamond 453 89.4 1 Eukaryota Opisthokonta Fungi Microsporidia       Dictyocoela Dictyocoela muelleri
32034052 32034052 PRJNA285816_S_NODE_26218_length_166_cov_0.888889_g26116_i0 PRJNA285816 26218 166 0.888889 1.47555574 Nematocida minor 1912983 Fungi Fungi 42.4 0.0159   NR XP_051332673.1 1912983 g26116 i0 40.8 0.885542168674699 49 24 84.9 2 162 22 7 52 XP_051332673.1 translation initiation factor 4E [Nematocida minor] diamond 147 42.4 1 Eukaryota Opisthokonta Fungi Microsporidia       Nematocida Nematocida minor

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;