contig_metadata
10 rows where analysis = "diamond", bioproject = "PRJNA283169" and tax_phylum = "Myxococcota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24597867 | 24597867 | PRJNA283169_P_NODE_2600_length_256_cov_1.000000_g2537_i0 | PRJNA283169 | 2600 | 256 | 1 | 2.56 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 148 | 3.78e-39 | NR | MBN8536102.1 | 2026735 | g2537 | i0 | 85.5 | 0.97265625 | 83 | 12 | 97.3 | 0 | 3 | 251 | 950 | 1032 | MBN8536102.1 DNA-directed RNA polymerase subunit beta' [Deltaproteobacteria bacterium] | diamond | 249 | 148 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 26725525 | 26725525 | PRJNA283169_S_NODE_3501_length_161_cov_0.080357_g3487_i0 | PRJNA283169 | 3501 | 161 | 0.080357 | 0.12937477 | Archangium sp. Cb G35 | 1920190 | Bacteria | Bacteria | 48.5 | 1.12e-4 | NR | WP_073561069.1 | 1920190 | g3487 | i0 | 54.7 | 0.987577639751553 | 53 | 24 | 98.8 | 0 | 1 | 159 | 1602 | 1654 | WP_073561069.1 Ig-like domain-containing protein [Archangium sp. Cb G35] | diamond | 159 | 48.5 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium sp. Cb G35 | ||
| 27168735 | 27168735 | PRJNA283169_P_NODE_902_length_409_cov_1.280556_g840_i0 | PRJNA283169 | 902 | 409 | 1.280556 | 5.23747404 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 121 | 8.979999999999998e-31 | NR | MBI3544264.1 | 2026735 | g840 | i0 | 54 | 1.00488997555012 | 137 | 50 | 99.8 | 3 | 1 | 408 | 77 | 201 | MBI3544264.1 50S ribosomal protein L15 [Deltaproteobacteria bacterium] | diamond | 411 | 121 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 27895261 | 27895261 | PRJNA283169_P_NODE_1985_length_290_cov_0.975104_g1923_i0 | PRJNA283169 | 1985 | 290 | 0.975104 | 2.8278016 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 143 | 3.48e-40 | NR | MBI5603935.1 | 2026735 | g1923 | i0 | 69.2 | 0.941379310344828 | 91 | 27 | 94.1 | 1 | 3 | 275 | 20 | 109 | MBI5603935.1 nucleotidyltransferase domain-containing protein [Deltaproteobacteria bacterium] | diamond | 273 | 143 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 27990210 | 27990210 | PRJNA283169_S_NODE_2585_length_179_cov_0.146154_g2571_i0 | PRJNA283169 | 2585 | 179 | 0.146154 | 0.26161566000000003 | Polyangiales bacterium | 3034171 | Bacteria | Bacteria | 54.7 | 9.57e-7 | NR | MFI5296679.1 | 3034171 | g2571 | i0 | 37.9 | 0.972067039106145 | 58 | 36 | 97.2 | 0 | 6 | 179 | 358 | 415 | MFI5296679.1 DNA polymerase [Polyangiales bacterium] | diamond | 174 | 54.7 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiales bacterium | |||||
| 28590189 | 28590189 | PRJNA283169_P_NODE_6927_length_166_cov_1.333333_g6864_i0 | PRJNA283169 | 6927 | 166 | 1.333333 | 2.21333278 | Archangium sp. | 1872627 | Bacteria | Bacteria | 44.3 | 0.00373 | NR | MFT3706953.1 | 1872627 | g6864 | i0 | 70.4 | 0.957831325301205 | 27 | 8 | 48.8 | 0 | 1 | 81 | 261 | 287 | MFT3706953.1 ABC transporter ATP-binding protein [Archangium sp.] | diamond | 159 | 44.3 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium sp. | ||
| 28810654 | 28810654 | PRJNA283169_P_NODE_728_length_450_cov_1.613466_g666_i0 | PRJNA283169 | 728 | 450 | 1.613466 | 7.260597 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 44.3 | 0.00677 | NR | MBW2126311.1 | 2026735 | g666 | i0 | 47.2 | 0.24 | 36 | 19 | 24 | 0 | 241 | 134 | 4 | 39 | MBW2126311.1 hypothetical protein [Deltaproteobacteria bacterium] | diamond | 108 | 44.3 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 29270545 | 29270545 | PRJNA283169_P_NODE_3089_length_236_cov_1.112299_g3026_i0 | PRJNA283169 | 3089 | 236 | 1.112299 | 2.62502564 | Myxococcia | 32015 | Bacteria | Bacteria | 55.8 | 6.94e-7 | NR | MBK6463597.1 | 2026763 | g3026 | i0 | 49 | 1.16949152542373 | 49 | 25 | 62.3 | 0 | 150 | 4 | 177 | 225 | MBK6463597.1 hypothetical protein [Myxococcales bacterium] | diamond | 276 | 55.8 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 30769308 | 30769308 | PRJNA283169_P_NODE_6674_length_168_cov_0.865546_g6611_i0 | PRJNA283169 | 6674 | 168 | 0.865546 | 1.45411728 | Polyangiales bacterium | 3034171 | Bacteria | Bacteria | 53.9 | 1.57e-6 | NR | HEX7477171.1 | 3034171 | g6611 | i0 | 50.9 | 0.982142857142857 | 55 | 24 | 98.2 | 2 | 168 | 4 | 499 | 550 | HEX7477171.1 right-handed parallel beta-helix repeat-containing protein [Polyangiales bacterium] | diamond | 165 | 53.9 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiales bacterium | |||||
| 31401544 | 31401544 | PRJNA283169_P_NODE_6776_length_167_cov_0.881356_g6713_i0 | PRJNA283169 | 6776 | 167 | 0.881356 | 1.47186452 | Archangiaceae bacterium | 2684409 | Bacteria | Bacteria | 48.9 | 8.9e-5 | NR | MBK7864325.1 | 2684409 | g6713 | i0 | 55.8 | 1.72455089820359 | 43 | 19 | 77.2 | 0 | 1 | 129 | 368 | 410 | MBK7864325.1 hypothetical protein [Archangiaceae bacterium] | diamond | 288 | 48.9 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangiaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;