RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA283169" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA283169 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28702524 28702524 PRJNA283169_P_NODE_3927_length_211_cov_1.283951_g3864_i0 PRJNA283169 3927 211 1.283951 2.70913661 Fungi 4751 Fungi Fungi 62.8 1.6e-9   NR XP_051430518.1 101096 g3864 i0 60.4 2.28909952606635 48 17 68.2 1 3 146 199 244 XP_051430518.1 Fructosamine/Ketosamine-3-kinase [Gilbertella persicaria] diamond 483 63.2 0.993670886075949 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Choanephoraceae Gilbertella Gilbertella persicaria
29523328 29523328 PRJNA283169_S_NODE_2970_length_169_cov_0.166667_g2956_i0 PRJNA283169 2970 169 0.166667 0.28166723 Mucoromycota 1913637 Fungi Fungi 67 8.63e-13   NR XP_021880037.1 64571 g2956 i0 55.4 2.94674556213018 56 25 99.4 0 168 1 9 64 XP_021880037.1 hypothetical protein BCR41DRAFT_338336 [Lobosporangium transversale] diamond 498 67.4 0.99406528189911 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Lobosporangium Lobosporangium transversale

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;