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contig_metadata

12 rows where analysis = "diamond", bioproject = "PRJNA283169" and tax_phylum = "Candidatus Parcubacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Parcubacteria · 12 ✖

tax_clade 1

bioproject 1

  • PRJNA283169 · 12 ✖

analysis 1

  • diamond · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8025096 8025096 PRJNA283169_P_NODE_8167_length_162_cov_0.893805_g8104_i0 PRJNA283169 8167 162 0.893805 1.4479641 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 105 1.32e-24   NR MBC7766798.1 2762014 g8104 i0 100 1.96296296296296 53 0 98.1 0 160 2 761 813 MBC7766798.1 excinuclease ABC subunit UvrA [Candidatus Parcubacteria bacterium] diamond 318 105 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
13125625 13125625 PRJNA283169_P_NODE_5831_length_177_cov_1.617188_g5768_i0 PRJNA283169 5831 177 1.617188 2.86242276 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 64.7 2.35e-10   NR MDO8660141.1 2762014 g5768 i0 66.7 0.711864406779661 42 14 71.2 0 131 6 45 86 MDO8660141.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 126 64.7 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
27926957 27926957 PRJNA283169_P_NODE_4565_length_198_cov_1.268456_g4502_i0 PRJNA283169 4565 198 1.268456 2.51154288 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 76.3 1.58e-15   NR MBX4199029.1 2762014 g4502 i0 78.6 1.24242424242424 42 9 63.6 0 72 197 52 93 MBX4199029.1 peptide-methionine (S)-S-oxide reductase MsrA [Candidatus Parcubacteria bacterium] diamond 246 76.3 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
28527074 28527074 PRJNA283169_P_NODE_4027_length_209_cov_0.975000_g3964_i0 PRJNA283169 4027 209 0.975 2.03775 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 84.3 5.21e-17   NR MFM2383437.1 2762014 g3964 i0 68.9 0.875598086124402 61 19 87.6 0 24 206 122 182 MFM2383437.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 183 84.3 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
29663162 29663162 PRJNA283169_S_NODE_1270_length_241_cov_0.098958_g1256_i0 PRJNA283169 1270 241 0.098958 0.23848878 Parcubacteria bacterium RAAC4_OD1_1 1394712 Bacteria Bacteria 77 1.92e-14   NR ETB63935.1 1394712 g1256 i0 55.8 0.95850622406639 77 33 95.9 1 8 238 50 125 ETB63935.1 MAG: hypothetical protein O210_OD1C00001G0408 [Parcubacteria bacterium RAAC4_OD1_1] diamond 231 77 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Parcubacteria bacterium RAAC4_OD1_1
29979342 29979342 PRJNA283169_S_NODE_2091_length_196_cov_0.149660_g2077_i0 PRJNA283169 2091 196 0.14966 0.29333360000000003 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 76.6 7.21e-15   NR MEN9880852.1 2762014 g2077 i0 68.4 0.872448979591837 57 18 87.2 0 174 4 93 149 MEN9880852.1 transporter, ATP-binding protein [Candidatus Parcubacteria bacterium] diamond 171 76.6 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
30232076 30232076 PRJNA283169_S_NODE_1172_length_249_cov_0.175000_g1158_i0 PRJNA283169 1172 249 0.175 0.43575 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 46.2 0.00244   NR MCG2700072.1 2762014 g1158 i0 41.3 0.759036144578313 63 36 75.9 1 240 52 193 254 MCG2700072.1 ribonuclease HII [Candidatus Parcubacteria bacterium] diamond 189 46.2 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
30264005 30264005 PRJNA283169_P_NODE_6272_length_171_cov_1.270492_g6209_i0 PRJNA283169 6272 171 1.270492 2.17254132 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 77 2.69e-15   NR MEN9338201.1 2762014 g6209 i0 69.4 0.859649122807018 49 15 86 0 171 25 195 243 MEN9338201.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 147 77 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
32002361 32002361 PRJNA283169_P_NODE_2358_length_268_cov_1.410959_g2296_i0 PRJNA283169 2358 268 1.410959 3.78137012 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 77.8 2.4e-14   NR MEN9881338.1 2762014 g2296 i0 53.4 0.985074626865672 88 40 98.5 1 5 268 704 790 MEN9881338.1 Serine/threonine-protein kinase PknD [Candidatus Parcubacteria bacterium] diamond 264 77.8 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
32413799 32413799 PRJNA283169_P_NODE_7959_length_162_cov_1.557522_g7896_i0 PRJNA283169 7959 162 1.557522 2.52318564 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 45.4 0.00124   NR MFM2330680.1 2762014 g7896 i0 82.8 0.537037037037037 29 5 53.7 0 89 3 16 44 MFM2330680.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 87 45.4 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
32477142 32477142 PRJNA283169_S_NODE_639_length_320_cov_0.110701_g625_i0 PRJNA283169 639 320 0.110701 0.3542432 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 110 1.15e-25   NR MFM2330637.1 2762014 g625 i0 64.4 1.725 104 36 97.5 1 312 1 994 1096 MFM2330637.1 hypothetical protein [Candidatus Parcubacteria bacterium] diamond 552 110 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
32634563 32634563 PRJNA283169_P_NODE_7920_length_163_cov_0.877193_g7857_i0 PRJNA283169 7920 163 0.877193 1.42982459 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 67.4 2.42e-11   NR RMD51698.1 2762014 g7857 i0 64.2 0.975460122699387 53 19 97.5 0 3 161 28 80 RMD51698.1 MAG: hypothetical protein D6827_01685 [Candidatus Parcubacteria bacterium] diamond 159 67.4 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;