RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA283169" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA283169 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29063752 29063752 PRJNA283169_P_NODE_7728_length_163_cov_1.350877_g7665_i0 PRJNA283169 7728 163 1.350877 2.20192951 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 96.7 1.0300000000000001e-22   NR MCX5712588.1 2035772 g7665 i0 79.6 0.993865030674847 54 11 99.4 0 1 162 161 214 MCX5712588.1 peptide chain release factor N(5)-glutamine methyltransferase [Candidatus Omnitrophota bacterium] diamond 162 96.7 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
29758126 29758126 PRJNA283169_P_NODE_2871_length_245_cov_1.311224_g2808_i0 PRJNA283169 2871 245 1.311224 3.2124988 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 43.9 0.0145   NR MEE8359917.1 2035772 g2808 i0 47.5 0.489795918367347 40 21 49 0 162 43 260 299 MEE8359917.1 O-antigen ligase family protein [Candidatus Omnitrophota bacterium] diamond 120 43.9 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
31717627 31717627 PRJNA283169_P_NODE_4817_length_194_cov_0.951724_g4754_i0 PRJNA283169 4817 194 0.951724 1.84634456 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 50.8 2.64e-5   NR MEI7999654.1 2035772 g4754 i0 41.3 0.974226804123711 63 35 97.4 1 1 189 114 174 MEI7999654.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 189 50.8 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;