RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "diamond", bioproject = "PRJNA283169" and tax_kingdom = "Shotokuvirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Shotokuvirae · 5 ✖

bioproject 1

  • PRJNA283169 · 5 ✖

analysis 1

  • diamond · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28148125 28148125 PRJNA283169_P_NODE_7085_length_166_cov_0.871795_g7022_i0 PRJNA283169 7085 166 0.871795 1.4471797 Genomoviridae sp. 2202565 Viruses Viruses 65.5 9.08e-11   NR QJB18634.1 2202565 g7022 i0 59.6 0.849397590361446 47 18 84.9 1 3 143 230 275 QJB18634.1 MAG: replication-associated protein [Genomoviridae sp.] diamond 141 65.5 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Genomoviridae   Genomoviridae sp.
29221684 29221684 PRJNA283169_S_NODE_1049_length_260_cov_0.132701_g1035_i0 PRJNA283169 1049 260 0.132701 0.3450226 Psittacidae aveparvovirus 2794556 Viruses Viruses 152 1.06e-41   NR QTE03752.1 2794556 g1035 i0 82.4 0.980769230769231 85 15 98.1 0 5 259 334 418 QTE03752.1 MAG: hypothetical protein [Psittacidae aveparvovirus] diamond 255 152 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Aveparvovirus Psittacidae aveparvovirus
29442249 29442249 PRJNA283169_P_NODE_7450_length_164_cov_1.330435_g7387_i0 PRJNA283169 7450 164 1.330435 2.1819134 Fish-associated parvo-like hybrid virus 3003968 Viruses Viruses 115 3.74e-29   NR QTE03928.1 3003968 g7387 i0 92.6 0.98780487804878 54 4 98.8 0 162 1 91 144 QTE03928.1 MAG: replication protein [Grus japonensis parvo-like hybrid virus] diamond 162 115 1 Viruses   Shotokuvirae Cressdnaviricota Arfiviricetes Lineavirales Oomyviridae Nicoomyvirus Fish-associated parvo-like hybrid virus
31464822 31464822 PRJNA283169_P_NODE_5896_length_176_cov_1.598425_g5833_i0 PRJNA283169 5896 176 1.598425 2.813228 Skomarfal virus 49 3063507 Viruses Viruses 97.8 8.159999999999999e-23   NR WPR18784.1 3063507 g5833 i0 77.6 1.97727272727273 58 13 98.9 0 2 175 26 83 WPR18784.1 MAG: hypothetical protein [Skomarfal virus 49] diamond 348 97.8 1 Viruses   Shotokuvirae Cressdnaviricota         Skomarfal virus 49
32223936 32223936 PRJNA283169_S_NODE_2458_length_183_cov_0.104478_g2444_i0 PRJNA283169 2458 183 0.104478 0.19119474 Chestnut teal chaphamaparvovirus 2759402 Viruses Viruses 47 5.18e-4   NR QMI57875.1 2759402 g2444 i0 48.9 1.63934426229508 47 23 77 1 145 5 294 339 QMI57875.1 nonstructural protein 1, partial [Chestnut teal chaphamaparvovirus] diamond 300 47 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Chaphamaparvovirus Chestnut teal chaphamaparvovirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;