RNAquarium Metadata Server
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contig_metadata

12 rows where analysis = "diamond", bioproject = "PRJNA280983" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 12 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA280983 · 12 ✖

analysis 1

  • diamond · 12 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23323682 23323682 PRJNA280983_P_NODE_1779_length_549_cov_22.040000_g1667_i0 PRJNA280983 1779 549 22.04 120.9996 Phakopsora pachyrhizi 170000 Fungi Fungi 199 1.71e-56   NR KAI8458878.1 170000 g1667 i0 58 2.80327868852459 169 59 85.8 3 40 510 1 169 KAI8458878.1 hypothetical protein BY996DRAFT_4576611 [Phakopsora pachyrhizi] diamond 1539 199 1 Eukaryota Opisthokonta Fungi Basidiomycota Pucciniomycetes Pucciniales Phakopsoraceae Phakopsora Phakopsora pachyrhizi
23323707 23323707 PRJNA280983_P_NODE_539_length_999_cov_2.425263_g468_i0 PRJNA280983 539 999 2.425263 24.22837737 Malassezia slooffiae 76776 Fungi Fungi 239 1.11e-70   NR AUN28263.1 76776 g468 i0 42.6 2.99099099099099 333 187 99.7 2 2 997 58 387 AUN28263.1 cytochrome c oxidase subunit 1 [Malassezia slooffiae] diamond 2988 239 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia slooffiae
26884433 26884433 PRJNA280983_P_NODE_9941_length_167_cov_0.864407_g9826_i0 PRJNA280983 9941 167 0.864407 1.44355969 Gautieria morchelliformis 112417 Fungi Fungi 73.2 2.46e-13   NR KAF8465185.1 112417 g9826 i0 61.8 0.988023952095808 55 21 98.8 0 3 167 494 548 KAF8465185.1 hypothetical protein JB92DRAFT_3063072 [Gautieria morchelliformis] diamond 165 73.2 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Gomphales Gomphaceae Gautieria Gautieria morchelliformis
27642981 27642981 PRJNA280983_P_NODE_8544_length_188_cov_0.899281_g8429_i0 PRJNA280983 8544 188 0.899281 1.69064828 Sistotremastrum niveocremeum HHB97 2834505 Fungi Fungi 44.3 0.00516   NR KZS88975.1 1314777 g8429 i0 46.9 0.781914893617021 49 23 73.4 1 46 183 3 51 KZS88975.1 Di-copper centre-containing protein [Sistotremastrum niveocremeum HHB9708] diamond 147 44.3 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Sistotremastrales Sistotremastraceae Sertulicium Sertulicium niveocremeum
27755423 27755423 PRJNA280983_P_NODE_5284_length_274_cov_3.484444_g5169_i0 PRJNA280983 5284 274 3.484444 9.54737656 Pucciniales 5258 Fungi Fungi 136 5.01e-35   NR KAG0147737.1 708437 g5169 i0 87.1 1.86131386861314 85 11 93.1 0 274 20 148 232 KAG0147737.1 hypothetical protein CROQUDRAFT_76239 [Cronartium quercuum f. sp. fusiforme G11] diamond 510 136 1 Eukaryota Opisthokonta Fungi Basidiomycota Pucciniomycetes Pucciniales Coleosporiaceae Cronartium Cronartium quercuum
28860142 28860142 PRJNA280983_P_NODE_3048_length_395_cov_11.982659_g2933_i0 PRJNA280983 3048 395 11.982659 47.33150305 Pucciniales 5258 Fungi Fungi 200 3.6700000000000003e-59   NR KAA1078633.1 56615 g2933 i0 74 4.81518987341772 127 30 95.7 2 395 18 43 167 KAA1078633.1 hypothetical protein PGTUg99_001054 [Puccinia graminis f. sp. tritici] diamond 1902 200 1 Eukaryota Opisthokonta Fungi Basidiomycota Pucciniomycetes Pucciniales Pucciniaceae Puccinia Puccinia graminis
29365511 29365511 PRJNA280983_P_NODE_1109_length_706_cov_11.544901_g1007_i0 PRJNA280983 1109 706 11.544901 81.50700106 Puccinia 5296 Fungi Fungi 215 2.79e-62   NR KNZ43732.1 27349 g1007 i0 46.7 5.21388101983003 242 114 96.9 4 705 22 107 347 KNZ43732.1 hypothetical protein VP01_992g5 [Puccinia sorghi] diamond 3681 215 1 Eukaryota Opisthokonta Fungi Basidiomycota Pucciniomycetes Pucciniales Pucciniaceae Puccinia Puccinia sorghi
30850024 30850024 PRJNA280983_P_NODE_1234_length_666_cov_43.371151_g1130_i0 PRJNA280983 1234 666 43.371151 288.85186566 Puccinia 5296 Fungi Fungi 74.7 1.22e-11   NR KNZ64449.1 27349 g1130 i0 92.1 1.65315315315315 38 3 17.1 0 133 20 28 65 KNZ64449.1 hypothetical protein VP01_1028g3 [Puccinia sorghi] diamond 1101 74.7 1 Eukaryota Opisthokonta Fungi Basidiomycota Pucciniomycetes Pucciniales Pucciniaceae Puccinia Puccinia sorghi
31102683 31102683 PRJNA280983_P_NODE_6435_length_236_cov_7.518717_g6320_i0 PRJNA280983 6435 236 7.518717 17.744172120000002 Pucciniales 5258 Fungi Fungi 143 1.65e-37   NR PLW22404.1 200324 g6320 i0 94.6 5.64406779661017 74 4 94.1 0 3 224 212 285 PLW22404.1 hypothetical protein PCASD_18618 [Puccinia coronata f. sp. avenae] diamond 1332 144 0.993055555555556 Eukaryota Opisthokonta Fungi Basidiomycota Pucciniomycetes Pucciniales Pucciniaceae Puccinia Puccinia coronata
31337990 31337990 PRJNA280983_P_NODE_9936_length_167_cov_0.864407_g9821_i0 PRJNA280983 9936 167 0.864407 1.44355969 Melampsora americana 2182807 Fungi Fungi 52.8 3.89e-6   NR KAH9819956.1 2182807 g9821 i0 41.8 0.988023952095808 55 32 98.8 0 3 167 313 367 KAH9819956.1 nucleoporin subcomplex protein binding to Pom34-domain-containing protein [Melampsora americana] diamond 165 52.8 1 Eukaryota Opisthokonta Fungi Basidiomycota Pucciniomycetes Pucciniales Melampsoraceae Melampsora Melampsora americana
32002357 32002357 PRJNA280983_P_NODE_8398_length_190_cov_1.446809_g8283_i0 PRJNA280983 8398 190 1.446809 2.7489371 Peniophora sp. CBMAI 1 1756134 Fungi Fungi 53.1 4.02e-6   NR VDB84260.1 718367 g8283 i0 69 1.64210526315789 29 9 45.8 0 87 1 728 756 VDB84260.1 unnamed protein product [Peniophora sp. CBMAI 1063] diamond 312 53.1 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Russulales Peniophoraceae Peniophora Peniophora sp. CBMAI 1063
32463104 32463104 PRJNA280983_P_NODE_10819_length_163_cov_0.894737_g10704_i0 PRJNA280983 10819 163 0.894737 1.45842131 Fungi 4751 Fungi Fungi 67.4 2.54e-11   NR OCB92269.1 108892 g10704 i0 50 4.63803680981595 52 26 95.7 0 156 1 67 118 OCB92269.1 tyrosinase [Sanghuangporus baumii] diamond 756 67.4 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Hymenochaetales Hymenochaetaceae Sanghuangporus Sanghuangporus baumii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;