contig_metadata
16 rows where analysis = "diamond", bioproject = "PRJNA280983" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 14400649 | 14400649 | PRJNA280983_P_NODE_2592_length_437_cov_4.440722_g2477_i0 | PRJNA280983 | 2592 | 437 | 4.440722 | 19.40595514 | Culicoidibacter larvae | 2579976 | Bacteria | Bacteria | 185 | 6.399999999999999e-55 | NR | WP_138191546.1 | 2579976 | g2477 | i0 | 69.9 | 0.844393592677345 | 123 | 34 | 82.4 | 1 | 68 | 427 | 3 | 125 | WP_138191546.1 TIGR01212 family radical SAM protein [Culicoidibacter larvae] | diamond | 369 | 185 | 1 | Bacteria | Bacillati | Bacillota | Culicoidibacteria | Culicoidibacterales | Culicoidibacteraceae | Culicoidibacter | Culicoidibacter larvae | ||
| 23323698 | 23323698 | PRJNA280983_P_NODE_439_length_1093_cov_2.160920_g374_i0 | PRJNA280983 | 439 | 1093 | 2.16092 | 23.6188556 | Bacilli bacterium | 1903720 | Bacteria | Bacteria | 278 | 1.25e-84 | NR | MEG1506368.1 | 1903720 | g374 | i0 | 95.9 | 0.406221408966148 | 148 | 6 | 40.6 | 0 | 445 | 2 | 51 | 198 | MEG1506368.1 replication initiation protein [Bacilli bacterium] | diamond | 444 | 278 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacilli bacterium | |||||
| 26630961 | 26630961 | PRJNA280983_P_NODE_9721_length_168_cov_0.915966_g9606_i0 | PRJNA280983 | 9721 | 168 | 0.915966 | 1.53882288 | Firmicutes bacterium CAG:345 | 1263020 | Bacteria | Bacteria | 41.2 | 0.0457 | NR | CDD23844.1 | 1263020 | g9606 | i0 | 48.5 | 0.589285714285714 | 33 | 17 | 58.9 | 0 | 166 | 68 | 133 | 165 | CDD23844.1 probable inorganic polyphosphate/ATP-NAD kinase [Firmicutes bacterium CAG:345] | diamond | 99 | 41.2 | 1 | Bacteria | Bacillati | Bacillota | Firmicutes bacterium CAG:345 | ||||||
| 28116285 | 28116285 | PRJNA280983_P_NODE_10265_length_165_cov_0.879310_g10150_i0 | PRJNA280983 | 10265 | 165 | 0.87931 | 1.4508615 | Listeria monocytogenes | 1639 | Bacteria | Bacteria | 44.7 | 2.93e-4 | NR | WP_369697475.1 | 1639 | g10150 | i0 | 92.6 | 0.490909090909091 | 27 | 2 | 49.1 | 0 | 165 | 85 | 38 | 64 | WP_369697475.1 hypothetical protein, partial [Listeria monocytogenes] | diamond | 81 | 44.7 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Listeriaceae | Listeria | Listeria monocytogenes | ||
| 28260171 | 28260171 | PRJNA280983_P_NODE_3326_length_374_cov_1.796923_g3211_i0 | PRJNA280983 | 3326 | 374 | 1.796923 | 6.72049202 | Thermoactinomycetaceae | 186824 | Bacteria | Bacteria | 104 | 1.94e-24 | NR | WP_107728182.1 | 500615 | g3211 | i0 | 47.4 | 1.83689839572193 | 114 | 60 | 91.4 | 0 | 29 | 370 | 128 | 241 | WP_107728182.1 ParB/RepB/Spo0J family partition protein [Desmospora activa] | diamond | 687 | 104 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Thermoactinomycetaceae | Desmospora | Desmospora activa | ||
| 28463846 | 28463846 | PRJNA280983_P_NODE_10646_length_164_cov_0.886957_g10531_i0 | PRJNA280983 | 10646 | 164 | 0.886957 | 1.45460948 | Priestia aryabhattai | 412384 | Bacteria | Bacteria | 50.4 | 2.4e-5 | NR | WP_413028423.1 | 412384 | g10531 | i0 | 48 | 0.914634146341463 | 50 | 25 | 91.5 | 1 | 13 | 162 | 178 | 226 | WP_413028423.1 glutathionylspermidine synthase family protein [Priestia aryabhattai] | diamond | 150 | 50.4 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Priestia | Priestia aryabhattai | ||
| 28716378 | 28716378 | PRJNA280983_P_NODE_2887_length_409_cov_1.036111_g2772_i0 | PRJNA280983 | 2887 | 409 | 1.036111 | 4.23769399 | Culicoidibacter larvae | 2579976 | Bacteria | Bacteria | 56.2 | 3.24e-6 | NR | WP_138189773.1 | 2579976 | g2772 | i0 | 59.5 | 0.271393643031785 | 37 | 15 | 27.1 | 0 | 12 | 122 | 258 | 294 | WP_138189773.1 ParB/RepB/Spo0J family partition protein [Culicoidibacter larvae] | diamond | 111 | 56.2 | 1 | Bacteria | Bacillati | Bacillota | Culicoidibacteria | Culicoidibacterales | Culicoidibacteraceae | Culicoidibacter | Culicoidibacter larvae | ||
| 29095313 | 29095313 | PRJNA280983_P_NODE_7208_length_216_cov_1.526946_g7093_i0 | PRJNA280983 | 7208 | 216 | 1.526946 | 3.29820336 | Thermicanus aegyptius | 94009 | Bacteria | Bacteria | 48.1 | 3.16e-4 | NR | WP_028986873.1 | 94009 | g7093 | i0 | 40.9 | 0.916666666666667 | 66 | 37 | 88.9 | 1 | 17 | 208 | 248 | 313 | WP_028986873.1 cell division protein FtsA [Thermicanus aegyptius] | diamond | 198 | 48.1 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillales Family X. Incertae Sedis | Thermicanus | Thermicanus aegyptius | ||
| 29316183 | 29316183 | PRJNA280983_P_NODE_10069_length_166_cov_0.871795_g9954_i0 | PRJNA280983 | 10069 | 166 | 0.871795 | 1.4471797 | Clostridia bacterium | 2044939 | Bacteria | Bacteria | 43.9 | 4.27e-4 | NR | MBQ6324469.1 | 2044939 | g9954 | i0 | 57.7 | 0.469879518072289 | 26 | 11 | 47 | 0 | 123 | 46 | 21 | 46 | MBQ6324469.1 hypothetical protein [Clostridia bacterium] | diamond | 78 | 43.9 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Clostridia bacterium | |||||
| 29694757 | 29694757 | PRJNA280983_P_NODE_1410_length_627_cov_3.856401_g1303_i0 | PRJNA280983 | 1410 | 627 | 3.856401 | 24.17963427 | Lachnospiraceae bacterium | 1898203 | Bacteria | Bacteria | 50.8 | 0.00142 | NR | MBO4267086.1 | 1898203 | g1303 | i0 | 28.9 | 0.679425837320574 | 142 | 81 | 60.3 | 5 | 501 | 124 | 185 | 322 | MBO4267086.1 tetratricopeptide repeat protein [Lachnospiraceae bacterium] | diamond | 426 | 50.8 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Lachnospiraceae bacterium | |||
| 29789659 | 29789659 | PRJNA280983_P_NODE_11111_length_162_cov_0.902655_g10996_i0 | PRJNA280983 | 11111 | 162 | 0.902655 | 1.4623011 | Bacillota bacterium | 1879010 | Bacteria | Bacteria | 48.5 | 5.67e-5 | NR | MCL6557201.1 | 1879010 | g10996 | i0 | 88.9 | 0.5 | 27 | 3 | 50 | 0 | 81 | 161 | 1 | 27 | MCL6557201.1 HK97 gp10 family phage protein [Bacillota bacterium] | diamond | 81 | 48.5 | 1 | Bacteria | Bacillati | Bacillota | Bacillota bacterium | ||||||
| 29821142 | 29821142 | PRJNA280983_P_NODE_4171_length_325_cov_1.847826_g4056_i0 | PRJNA280983 | 4171 | 325 | 1.847826 | 6.0054345 | Clostridioides difficile | 1496 | Bacteria | Bacteria | 56.2 | 3.73e-7 | NR | WP_320076599.1 | 1496 | g4056 | i0 | 75.8 | 0.304615384615385 | 33 | 8 | 30.5 | 0 | 104 | 202 | 114 | 146 | WP_320076599.1 hypothetical protein, partial [Clostridioides difficile] | diamond | 99 | 56.2 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Peptostreptococcales | Peptostreptococcaceae | Clostridioides | Clostridioides difficile | ||
| 29902333 | 29902333 | PRJNA280983_P_NODE_3771_length_346_cov_2.387205_g3656_i0 | PRJNA280983 | 3771 | 346 | 2.387205 | 8.2597293 | Bacillales | 1385 | Bacteria | Bacteria | 104 | 7.35e-26 | NR | WP_128122244.1 | 2292355 | g3656 | i0 | 68 | 12.9884393063584 | 75 | 24 | 65 | 0 | 346 | 122 | 59 | 133 | WP_128122244.1 rRNA maturation RNase YbeY [Exiguobacterium sp. AM39-5BH] | diamond | 4494 | 105 | 0.990476190476191 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Exiguobacterium | Exiguobacterium sp. AM39-5BH | |||
| 30611098 | 30611098 | PRJNA280983_P_NODE_4513_length_308_cov_6.007722_g4398_i0 | PRJNA280983 | 4513 | 308 | 6.007722 | 18.50378376 | Clostridioides difficile | 1496 | Bacteria | Bacteria | 111 | 1.05e-28 | NR | WP_320076599.1 | 1496 | g4398 | i0 | 91.4 | 0.564935064935065 | 58 | 5 | 56.5 | 0 | 133 | 306 | 1 | 58 | WP_320076599.1 hypothetical protein, partial [Clostridioides difficile] | diamond | 174 | 111 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Peptostreptococcales | Peptostreptococcaceae | Clostridioides | Clostridioides difficile | ||
| 31165721 | 31165721 | PRJNA280983_P_NODE_2195_length_484_cov_3.521839_g2082_i0 | PRJNA280983 | 2195 | 484 | 3.521839 | 17.04570076 | Romboutsia | 1501226 | Bacteria | Bacteria | 205 | 3.5400000000000004e-64 | NR | WP_071119150.1 | 1776391 | g2082 | i0 | 63.2 | 2.82644628099174 | 152 | 56 | 94.2 | 0 | 465 | 10 | 55 | 206 | WP_071119150.1 PH domain-containing protein [Romboutsia timonensis] | diamond | 1368 | 207 | 0.990338164251208 | Bacteria | Bacillati | Bacillota | Clostridia | Peptostreptococcales | Peptostreptococcaceae | Romboutsia | Romboutsia timonensis | ||
| 31432910 | 31432910 | PRJNA280983_P_NODE_2256_length_474_cov_2.247059_g2143_i0 | PRJNA280983 | 2256 | 474 | 2.247059 | 10.65105966 | Culicoidibacter larvae | 2579976 | Bacteria | Bacteria | 186 | 3.1099999999999988e-55 | NR | WP_138190957.1 | 2579976 | g2143 | i0 | 60.8 | 1 | 158 | 61 | 100 | 1 | 1 | 474 | 61 | 217 | WP_138190957.1 2-oxoacid:acceptor oxidoreductase family protein [Culicoidibacter larvae] | diamond | 474 | 186 | 1 | Bacteria | Bacillati | Bacillota | Culicoidibacteria | Culicoidibacterales | Culicoidibacteraceae | Culicoidibacter | Culicoidibacter larvae |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;