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contig_metadata

25 rows where analysis = "diamond", bioproject = "PRJNA280983" and tax_clade = "Embryophyta"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Embryophyta · 25 ✖

bioproject 1

  • PRJNA280983 · 25 ✖

analysis 1

  • diamond · 25 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5475028 5475028 PRJNA280983_P_NODE_1705_length_562_cov_1.656920_g1595_i0 PRJNA280983 1705 562 1.65692 9.3118904 Eukaryota 2759 Plants Plants 320 2.2999999999999994e-107   NR BAK02675.1 112509 g1595 i0 82.4 10.644128113879 182 32 97.2 0 561 16 152 333 BAK02675.1 predicted protein [Hordeum vulgare subsp. vulgare] diamond 5982 320 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
5475036 5475036 PRJNA280983_P_NODE_2905_length_407_cov_2.019553_g2790_i0 PRJNA280983 2905 407 2.019553 8.21958071 Hordeum vulgare subsp. vulgare 112509 Plants Plants 99 4.22e-21   NR BAJ93760.1 112509 g2790 i0 50.4 2.86732186732187 129 30 70 4 5 289 402 530 BAJ93760.1 predicted protein [Hordeum vulgare subsp. vulgare] diamond 1167 99 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
26694176 26694176 PRJNA280983_P_NODE_9781_length_167_cov_0.864407_g9666_i0 PRJNA280983 9781 167 0.864407 1.44355969 Spinacia oleracea 3562 Plants Plants 63.5 6.04e-10   NR XP_021851927.1 3562 g9666 i0 93.3 1.63473053892216 30 2 53.9 0 70 159 673 702 XP_021851927.1 centromere/kinetochore protein zw10 homolog isoform X2 [Spinacia oleracea] diamond 273 63.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Caryophyllales Chenopodiaceae Spinacia Spinacia oleracea
26852859 26852859 PRJNA280983_P_NODE_8521_length_188_cov_1.309353_g8406_i0 PRJNA280983 8521 188 1.309353 2.46158364 Pistacia vera 55513 Plants Plants 70.5 2.92e-12   NR XP_031270500.1 55513 g8406 i0 64.6 4.53191489361702 48 17 76.6 0 188 45 215 262 XP_031270500.1 uncharacterized protein LOC116128868 [Pistacia vera] diamond 852 70.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Sapindales Anacardiaceae Pistacia Pistacia vera
26915895 26915895 PRJNA280983_P_NODE_10682_length_164_cov_0.886957_g10567_i0 PRJNA280983 10682 164 0.886957 1.45460948 Zizania palustris 103762 Plants Plants 43.9 0.00496   NR KAG8059836.1 103762 g10567 i0 42.3 0.951219512195122 52 28 95.1 2 6 161 8 57 KAG8059836.1 hypothetical protein GUJ93_ZPchr0002g23452 [Zizania palustris] diamond 156 43.9 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Zizania Zizania palustris
26996716 26996716 PRJNA280983_P_NODE_10022_length_166_cov_0.871795_g9907_i0 PRJNA280983 10022 166 0.871795 1.4471797 Magnoliopsida 3398 Plants Plants 68.2 1.36e-11   NR KAJ0667092.1 4232 g9907 i0 50.8 2.18674698795181 61 23 97.6 1 164 3 223 283 KAJ0667092.1 putative RNA-directed DNA polymerase [Helianthus annuus] diamond 363 68.6 0.994169096209913 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Helianthus Helianthus annuus
27074087 27074087 PRJNA280983_P_NODE_10122_length_166_cov_0.871795_g10007_i0 PRJNA280983 10122 166 0.871795 1.4471797 Tagetes erecta 13708 Plants Plants 90.9 1.45e-19   NR KAK1434639.1 13708 g10007 i0 89.4 0.849397590361446 47 5 84.9 0 141 1 695 741 KAK1434639.1 hypothetical protein QVD17_00388 [Tagetes erecta] diamond 141 90.9 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Tagetes Tagetes erecta
27200318 27200318 PRJNA280983_P_NODE_10642_length_164_cov_0.886957_g10527_i0 PRJNA280983 10642 164 0.886957 1.45460948 Spinacia oleracea 3562 Plants Plants 55.1 5.54e-7   NR XP_021855296.1 3562 g10527 i0 92.3 0.951219512195122 26 2 47.6 0 163 86 186 211 XP_021855296.1 agmatine deiminase [Spinacia oleracea] diamond 156 55.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Caryophyllales Chenopodiaceae Spinacia Spinacia oleracea
27912829 27912829 PRJNA280983_P_NODE_10345_length_165_cov_0.879310_g10230_i0 PRJNA280983 10345 165 0.87931 1.4508615 Eukaryota 2759 Plants Plants 66.6 4.74e-11   NR BAK01753.1 112509 g10230 i0 100 6 33 0 60 0 3 101 557 589 BAK01753.1 predicted protein [Hordeum vulgare subsp. vulgare] diamond 990 66.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
28179288 28179288 PRJNA280983_P_NODE_1546_length_593_cov_1.694853_g1436_i0 PRJNA280983 1546 593 1.694853 10.05047829 Hordeum vulgare subsp. vulgare 112509 Plants Plants 117 8.23e-27   NR BAJ93760.1 112509 g1436 i0 41.5 1.15851602023609 229 86 97.1 6 591 16 84 301 BAJ93760.1 predicted protein [Hordeum vulgare subsp. vulgare] diamond 687 117 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
28368885 28368885 PRJNA280983_P_NODE_9446_length_172_cov_1.634146_g9331_i0 PRJNA280983 9446 172 1.634146 2.81073112 Dillenia turbinata 194707 Plants Plants 62.4 1.6e-9   NR KAK6917196.1 194707 g9331 i0 59.1 0.767441860465116 44 18 76.7 0 3 134 398 441 KAK6917196.1 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site, partial [Dillenia turbinata] diamond 132 62.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Dilleniales Dilleniaceae Dillenia Dillenia turbinata
28449968 28449968 PRJNA280983_P_NODE_10986_length_162_cov_1.654867_g10871_i0 PRJNA280983 10986 162 1.654867 2.68088454 Eukaryota 2759 Plants Plants 54.7 7.4e-7   NR KAK1428844.1 13708 g10871 i0 62.5 5.35185185185185 40 15 74.1 0 42 161 647 686 KAK1428844.1 hypothetical protein QVD17_17684 [Tagetes erecta] diamond 867 55.1 0.992740471869329 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Tagetes Tagetes erecta
28702521 28702521 PRJNA280983_P_NODE_9367_length_173_cov_2.161290_g9252_i0 PRJNA280983 9367 173 2.16129 3.7390317 Caryophyllales 3524 Plants Plants 87 3.57e-18   NR KAJ8446711.1 171969 g9252 i0 72.9 4.07514450867052 59 14 98.8 1 173 3 384 442 KAJ8446711.1 hypothetical protein Cgig2_002873 [Carnegiea gigantea] diamond 705 87 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Caryophyllales Cactaceae Carnegiea Carnegiea gigantea
28891628 28891628 PRJNA280983_P_NODE_10668_length_164_cov_0.886957_g10553_i0 PRJNA280983 10668 164 0.886957 1.45460948 Solanaceae 4070 Plants Plants 85.9 7.96e-18   NR XP_019236372.1 49451 g10553 i0 75 5.78048780487805 52 13 95.1 0 7 162 472 523 XP_019236372.1 PREDICTED: RNA-directed DNA polymerase from mobile element jockey-like, partial [Nicotiana attenuata] diamond 948 85.9 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Nicotiana Nicotiana attenuata
29252797 29252797 PRJNA280983_P_NODE_909_length_782_cov_1.435198_g808_i0 PRJNA280983 909 782 1.435198 11.22324836 Hordeum vulgare subsp. vulgare 112509 Plants Plants 125 8.99e-29   NR BAJ93760.1 112509 g808 i0 40 1.13171355498721 295 103 90.5 14 75 782 119 398 BAJ93760.1 predicted protein [Hordeum vulgare subsp. vulgare] diamond 885 125 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
29410807 29410807 PRJNA280983_P_NODE_10149_length_166_cov_0.871795_g10034_i0 PRJNA280983 10149 166 0.871795 1.4471797 Pyrus ussuriensis x Pyrus communis 2448454 Plants Plants 63.2 4.44e-11   NR KAB2605751.1 2448454 g10034 i0 68.9 2.33132530120482 45 11 75.9 1 25 150 53 97 KAB2605751.1 hypothetical protein D8674_005468 [Pyrus ussuriensis x Pyrus communis] diamond 387 63.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Rosaceae Pyrus Pyrus ussuriensis x Pyrus communis
29410812 29410812 PRJNA280983_P_NODE_7509_length_209_cov_0.931250_g7394_i0 PRJNA280983 7509 209 0.93125 1.9463125 Carnegiea gigantea 171969 Plants Plants 51.2 2.41e-5   NR KAJ8442822.1 171969 g7394 i0 76 0.358851674641148 25 6 35.9 0 116 190 314 338 KAJ8442822.1 hypothetical protein Cgig2_016288 [Carnegiea gigantea] diamond 75 51.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Caryophyllales Cactaceae Carnegiea Carnegiea gigantea
30628679 30628679 PRJNA280983_P_NODE_9753_length_167_cov_1.593220_g9638_i0 PRJNA280983 9753 167 1.59322 2.6606774 Magnoliopsida 3398 Plants Plants 57 1.23e-7   NR GMH04189.1 150966 g9638 i0 75 3.41317365269461 32 8 57.5 0 1 96 786 817 GMH04189.1 hypothetical protein Nepgr_006028 [Nepenthes gracilis] diamond 570 57 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Caryophyllales Nepenthaceae Nepenthes Nepenthes gracilis
30723628 30723628 PRJNA280983_P_NODE_94_length_1841_cov_2.090402_g70_i0 PRJNA280983 94 1841 2.090402 38.48430082 Eukaryota 2759 Plants Plants 762 3.29e-270   NR XP_013642611.2 3708 g70 i0 62 66.7463335143944 603 221 97.8 4 1818 19 5 602 XP_013642611.2 ABC transporter E family member 1 isoform X1 [Brassica napus] diamond 122880 768 0.9921875 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Brassicaceae Brassica Brassica napus
31102685 31102685 PRJNA280983_P_NODE_8755_length_184_cov_1.377778_g8640_i0 PRJNA280983 8755 184 1.377778 2.53511152 Caryophyllales 3524 Plants Plants 73.6 2.25e-13   NR KAK9713781.1 3572 g8640 i0 66 3.45652173913043 53 16 86.4 1 18 176 887 937 KAK9713781.1 hypothetical protein RND81_06G051200 [Saponaria officinalis] diamond 636 74.3 0.990578734858681 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Caryophyllales Caryophyllaceae Saponaria Saponaria officinalis
31134131 31134131 PRJNA280983_P_NODE_9795_length_167_cov_0.864407_g9680_i0 PRJNA280983 9795 167 0.864407 1.44355969 Eukaryota 2759 Plants Plants 85.1 2.43e-19   NR XP_016515165.1 4097 g9680 i0 70.9 11.7664670658683 55 16 98.8 0 167 3 56 110 XP_016515165.1 eukaryotic translation initiation factor 1A-like [Nicotiana tabacum] diamond 1965 85.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Nicotiana Nicotiana tabacum
31464811 31464811 PRJNA280983_P_NODE_10796_length_163_cov_0.894737_g10681_i0 PRJNA280983 10796 163 0.894737 1.45842131 Heliosperma pusillum 39905 Plants Plants 75.9 2.38e-14   NR KAH9608911.1 39905 g10681 i0 84.6 3.60736196319018 39 6 71.8 0 43 159 302 340 KAH9608911.1 hypothetical protein KSS87_019301, partial [Heliosperma pusillum] diamond 588 75.9 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Caryophyllales Caryophyllaceae Heliosperma Heliosperma pusillum
31559669 31559669 PRJNA280983_P_NODE_10236_length_165_cov_0.879310_g10121_i0 PRJNA280983 10236 165 0.87931 1.4508615 Chenopodium quinoa 63459 Plants Plants 74.7 3.52e-14   NR XP_021756299.1 63459 g10121 i0 76.2 4.67272727272727 42 10 76.4 0 161 36 241 282 XP_021756299.1 serrate RNA effector molecule homolog isoform X3 [Chenopodium quinoa] diamond 771 74.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Caryophyllales Chenopodiaceae Chenopodium Chenopodium quinoa
31829987 31829987 PRJNA280983_P_NODE_2837_length_414_cov_1.545205_g2722_i0 PRJNA280983 2837 414 1.545205 6.3971487 Eukaryota 2759 Plants Plants 125 1.33e-32   NR BAK00444.1 112509 g2722 i0 72.4 1.48550724637681 105 19 76.1 2 401 87 142 236 BAK00444.1 predicted protein [Hordeum vulgare subsp. vulgare] diamond 615 125 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
32382087 32382087 PRJNA280983_P_NODE_9319_length_174_cov_1.264000_g9204_i0 PRJNA280983 9319 174 1.264 2.19936 Saponaria officinalis 3572 Plants Plants 74.7 7.68e-14   NR KAK9725148.1 3572 g9204 i0 91.7 1.24137931034483 36 3 62.1 0 1 108 414 449 KAK9725148.1 hypothetical protein RND81_05G125200 [Saponaria officinalis] diamond 216 74.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Caryophyllales Caryophyllaceae Saponaria Saponaria officinalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;