RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA280983" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 2 ✖

bioproject 1

  • PRJNA280983 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26789392 26789392 PRJNA280983_P_NODE_7861_length_201_cov_0.940789_g7746_i0 PRJNA280983 7861 201 0.940789 1.89098589 Cyanothece sp. SIO2G6 2607797 Bacteria Bacteria 45.8 0.00176   NR NEQ98296.1 2607797 g7746 i0 37.5 0.835820895522388 56 31 83.6 1 11 178 1497 1548 NEQ98296.1 TIR domain-containing protein [Cyanothece sp. SIO2G6] diamond 168 45.8 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Gomontiellales Cyanothecaceae Cyanothece Cyanothece sp. SIO2G6
26821120 26821120 PRJNA280983_P_NODE_10201_length_165_cov_1.715517_g10086_i0 PRJNA280983 10201 165 1.715517 2.83060305 Candidatus Obscuribacter sp. 2711154 Bacteria Bacteria 61.2 4.15e-11   NR MBL8086392.1 2711154 g10086 i0 96.7 0.545454545454545 30 1 54.5 0 55 144 1 30 MBL8086392.1 hypothetical protein [Candidatus Obscuribacter sp.] diamond 90 61.2 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales Candidatus Obscuribacteraceae Candidatus Obscuribacter Candidatus Obscuribacter sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;