RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA278119" and tax_phylum = "Lenarviricota"

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tax_superkingdom 1

tax_phylum 1

  • Lenarviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA278119 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31812470 31812470 PRJNA278119_P_NODE_19697_length_226_cov_1.124294_g19448_i0 PRJNA278119 19697 226 1.124294 2.54090444 Botourmiaviridae sp. 2808997 Viruses Viruses 56.6 3.82e-7   NR WAK77973.1 2808997 g19448 i0 87.1 0.411504424778761 31 4 41.2 0 1 93 482 512 WAK77973.1 MAG: RNA-dependent RNA polymerase [Botourmiaviridae sp.] diamond 93 56.6 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae   Botourmiaviridae sp.
32589624 32589624 PRJNA278119_P_NODE_33519_length_171_cov_1.975410_g33270_i0 PRJNA278119 33519 171 1.97541 3.3779511 Scleroulivirus 2560226 Viruses Viruses 67.4 2.89e-11   NR YP_010800270.1 2686549 g33270 i0 84.6 2.05263157894737 39 5 68.4 1 1 117 597 634 YP_010800270.1 RNA dependent RNA polymerase [Plasmopara viticola lesion associated ourmia-like virus 76] diamond 351 67.4 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae Scleroulivirus Scleroulivirus omicronplasmoparae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;