RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA278119" and tax_kingdom = "Nanobdellati"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_kingdom 1

  • Nanobdellati · 2 ✖

bioproject 1

  • PRJNA278119 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30516389 30516389 PRJNA278119_P_NODE_27033_length_190_cov_1.475177_g26784_i0 PRJNA278119 27033 190 1.475177 2.8028363 Nanobdellota archaeon 2026764 Archaea Archaea 41.6 0.00938   NR MEK6828590.1 2026764 g26784 i0 42.2 0.710526315789474 45 25 69.5 1 56 187 1 45 MEK6828590.1 hypothetical protein [Nanoarchaeota archaeon] diamond 135 41.6 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
32160699 32160699 PRJNA278119_P_NODE_21038_length_217_cov_1.148810_g20789_i0 PRJNA278119 21038 217 1.14881 2.4929177 Candidatus Micrarchaeia archaeon 3018267 Archaea Archaea 42 0.0485   NR MFA6329842.1 3018267 g20789 i0 62.1 0.400921658986175 29 10 38.7 1 11 94 71 99 MFA6329842.1 hypothetical protein [Candidatus Micrarchaeia archaeon] diamond 87 42 1 Archaea   Nanobdellati Candidatus Micrarchaeota Candidatus Micrarchaeia       Candidatus Micrarchaeia archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;