RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "diamond", bioproject = "PRJNA274362" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 9 ✖

tax_clade 1

bioproject 1

  • PRJNA274362 · 9 ✖

analysis 1

  • diamond · 9 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27453478 27453478 PRJNA274362_S_NODE_32083_length_169_cov_0.866667_g31963_i0 PRJNA274362 32083 169 0.866667 1.46466723 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 86.3 5.5e-18   NR XP_004334520.1 1257118 g31963 i0 65.5 0.976331360946746 55 19 97.6 0 3 167 349 403 XP_004334520.1 CMF receptor CMFR1, putative [Acanthamoeba castellanii str. Neff] diamond 165 86.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27516430 27516430 PRJNA274362_S_NODE_29503_length_175_cov_1.206349_g29383_i0 PRJNA274362 29503 175 1.206349 2.11111075 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 54.7 6.45e-8   NR XP_004333525.1 1257118 g29383 i0 58.3 0.822857142857143 48 20 82.3 0 159 16 2 49 XP_004333525.1 Actobindin, putative [Acanthamoeba castellanii str. Neff] diamond 144 54.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27849706 27849706 PRJNA274362_S_NODE_15744_length_227_cov_1.550562_g15624_i0 PRJNA274362 15744 227 1.550562 3.51977574 root 1 Root_unresolved Root_unresolved 84.3 8.85e-19   NR 7SOG_A 5755 g15624 i0 50.7 3.77973568281938 71 35 93.8 0 215 3 28 98 7SOG_A Chain A, Actophorin [Acanthamoeba castellanii] diamond 858 84.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28242464 28242464 PRJNA274362_S_NODE_30206_length_173_cov_1.258065_g30086_i0 PRJNA274362 30206 173 1.258065 2.17645245 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 99.4 8.789999999999999e-23   NR XP_004337281.1 1257118 g30086 i0 84.2 0.988439306358382 57 9 98.8 0 173 3 329 385 XP_004337281.1 calponin domain containing protein [Acanthamoeba castellanii str. Neff] diamond 171 99.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28810583 28810583 PRJNA274362_S_NODE_15328_length_230_cov_1.138122_g15208_i0 PRJNA274362 15328 230 1.138122 2.6176806 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 124 8.81e-34   NR XP_004337603.1 1257118 g15208 i0 81.6 1.98260869565217 76 14 99.1 0 230 3 128 203 XP_004337603.1 ribosomal protein L23, putative [Acanthamoeba castellanii str. Neff] diamond 456 124 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30674265 30674265 PRJNA274362_S_NODE_25653_length_186_cov_1.386861_g25533_i0 PRJNA274362 25653 186 1.386861 2.57956146 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 57 2.41e-8   NR XP_004348720.1 1257118 g25533 i0 61.2 0.790322580645161 49 19 79 0 1 147 80 128 XP_004348720.1 actin binding protein [Acanthamoeba castellanii str. Neff] diamond 147 57 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30800626 30800626 PRJNA274362_S_NODE_22054_length_198_cov_1.375839_g21934_i0 PRJNA274362 22054 198 1.375839 2.72416122 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 96.3 8.97e-24   NR 1F2K_A 5755 g21934 i0 75.4 0.924242424242424 61 15 92.4 0 197 15 65 125 1F2K_A Chain A, PROFILIN II [Acanthamoeba castellanii] diamond 183 96.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31401484 31401484 PRJNA274362_S_NODE_13496_length_242_cov_2.134715_g13376_i0 PRJNA274362 13496 242 2.134715 5.1660103 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 97.1 1.0799999999999999e-23   NR 7SOG_A 5755 g13376 i0 62.5 2.72727272727273 72 27 89.3 0 16 231 3 74 7SOG_A Chain A, Actophorin [Acanthamoeba castellanii] diamond 660 97.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32791988 32791988 PRJNA274362_S_NODE_13400_length_243_cov_1.654639_g13280_i0 PRJNA274362 13400 243 1.654639 4.02077277 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 68.9 1.07e-12   NR XP_004348720.1 1257118 g13280 i0 47.4 0.962962962962963 78 35 95.1 2 242 12 58 130 XP_004348720.1 actin binding protein [Acanthamoeba castellanii str. Neff] diamond 234 68.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;