RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA274362" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Orthornavirae · 3 ✖

bioproject 1

  • PRJNA274362 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29284378 29284378 PRJNA274362_S_NODE_16689_length_222_cov_1.202312_g16569_i0 PRJNA274362 16689 222 1.202312 2.66913264 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 72 1.37e-12   NR XBH23991.1 3063761 g16569 i0 60 2.17567567567568 55 21 73 1 220 59 795 849 XBH23991.1 MAG: polyprotein, partial [Rousettus bat picornavirus] diamond 483 72 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Danio blood picornavirus/Zebrafish picornavirus 2
29568673 29568673 PRJNA274362_S_NODE_15990_length_226_cov_0.881356_g15870_i0 PRJNA274362 15990 226 0.881356 1.99186456 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 79 5.42e-15   NR AVM87439.1 3063761 g15870 i0 46.3 1.08849557522124 82 37 99.6 1 1 225 1027 1108 AVM87439.1 polyprotein [Wuhan sharpbelly picornavirus 1] diamond 246 79 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Danio blood picornavirus/Zebrafish picornavirus 2
32872738 32872738 PRJNA274362_S_NODE_10420_length_270_cov_1.642534_g10300_i0 PRJNA274362 10420 270 1.642534 4.4348418 Viruses 10239 Viruses Viruses 65.9 3.86e-10   NR AVM87439.1 2116200 g10300 i0 53.4 1.35555555555556 58 27 64.4 0 95 268 928 985 AVM87439.1 polyprotein [Wuhan sharpbelly picornavirus 1] diamond 366 65.9 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Wuhan sharpbelly picornavirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;