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contig_metadata

29 rows where analysis = "diamond", bioproject = "PRJNA274362" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 29 ✖

bioproject 1

  • PRJNA274362 · 29 ✖

analysis 1

  • diamond · 29 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1645556 1645556 PRJNA274362_S_NODE_3302_length_453_cov_2.987624_g3182_i0 PRJNA274362 3302 453 2.987624 13.53393672 Dictyosteliales 2058949 Evosea other_Eukaryota 103 5.58e-26   NR XP_628995.1 352472 g3182 i0 64.5 1.00662251655629 76 27 50.3 0 31 258 1 76 XP_628995.1 40S ribosomal protein S21 [Dictyostelium discoideum AX4] diamond 456 103 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
6748081 6748081 PRJNA274362_S_NODE_15186_length_231_cov_1.142857_g15066_i0 PRJNA274362 15186 231 1.142857 2.63999967 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 134 2.7e-34   NR XP_004350624.1 261658 g15066 i0 82.9 12.8701298701299 76 13 98.7 0 4 231 345 420 XP_004350624.1 elongation factor 2 [Cavenderia fasciculata] diamond 2973 134 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
7436492 7436492 PRJNA274362_S_NODE_20606_length_204_cov_0.825806_g20486_i0 PRJNA274362 20606 204 0.825806 1.68464424 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 79.7 7.77e-16   NR KAH3732769.1 1580589 g20486 i0 65 0.882352941176471 60 19 85.3 1 196 23 101 160 KAH3732769.1 actin bundling protein [Pelomyxa schiedti] diamond 180 79.7 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
11261757 11261757 PRJNA274362_S_NODE_20949_length_202_cov_1.679739_g20829_i0 PRJNA274362 20949 202 1.679739 3.39307278 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 108 2.35e-26   NR XP_003293941.1 5786 g20829 i0 77.3 4.91584158415842 66 15 98 0 201 4 298 363 XP_003293941.1 S-adenosylmethionine synthetase [Dictyostelium purpureum] diamond 993 108 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
16947815 16947815 PRJNA274362_S_NODE_17814_length_216_cov_1.245509_g17694_i0 PRJNA274362 17814 216 1.245509 2.69029944 Arcellinida 318493 Tubulinea other_Eukaryota 120 2.84e-32   NR AFX73089.1 497998 g17694 i0 72.9 9.80555555555556 70 19 97.2 0 4 213 27 96 AFX73089.1 elongation factor 2 alpha, partial [Arcella hemisphaerica] diamond 2118 120 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Arcellidae Arcella Arcella hemisphaerica
22047048 22047048 PRJNA274362_S_NODE_22558_length_196_cov_1.625850_g22438_i0 PRJNA274362 22558 196 1.62585 3.186666 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 113 1.22e-30   NR KAF2076787.1 133409 g22438 i0 83.1 5.96938775510204 65 11 99.5 0 2 196 37 101 KAF2076787.1 hypothetical protein CYY_001913 [Polysphondylium violaceum] diamond 1170 113 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
26630918 26630918 PRJNA274362_S_NODE_32621_length_168_cov_1.252101_g32501_i0 PRJNA274362 32621 168 1.252101 2.10352968 Physarum polycephalum 5791 Evosea other_Eukaryota 73.9 1.06e-13   NR AAD24195.1 5791 g32501 i0 68.1 1.80357142857143 47 15 83.9 0 145 5 140 186 AAD24195.1 fragmin A [Physarum polycephalum] diamond 303 73.9 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
26725468 26725468 PRJNA274362_S_NODE_34781_length_165_cov_1.344828_g34661_i0 PRJNA274362 34781 165 1.344828 2.2189662 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 85.5 7.4e-19   NR PRP80408.1 1890364 g34661 i0 75.9 0.981818181818182 54 13 98.2 0 164 3 93 146 PRP80408.1 40S ribosomal protein S9 [Planoprotostelium fungivorum] diamond 162 85.5 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
27453478 27453478 PRJNA274362_S_NODE_32083_length_169_cov_0.866667_g31963_i0 PRJNA274362 32083 169 0.866667 1.46466723 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 86.3 5.5e-18   NR XP_004334520.1 1257118 g31963 i0 65.5 0.976331360946746 55 19 97.6 0 3 167 349 403 XP_004334520.1 CMF receptor CMFR1, putative [Acanthamoeba castellanii str. Neff] diamond 165 86.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27516430 27516430 PRJNA274362_S_NODE_29503_length_175_cov_1.206349_g29383_i0 PRJNA274362 29503 175 1.206349 2.11111075 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 54.7 6.45e-8   NR XP_004333525.1 1257118 g29383 i0 58.3 0.822857142857143 48 20 82.3 0 159 16 2 49 XP_004333525.1 Actobindin, putative [Acanthamoeba castellanii str. Neff] diamond 144 54.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27800741 27800741 PRJNA274362_S_NODE_16424_length_223_cov_1.839080_g16304_i0 PRJNA274362 16424 223 1.83908 4.1011484 Heterostelium album PN5 2086695 Evosea other_Eukaryota 64.3 1.52e-10   NR XP_020426699.1 670386 g16304 i0 37 2.97309417040359 73 46 98.2 0 5 223 26 98 XP_020426699.1 hypothetical protein PPL_00065 [Heterostelium album PN500] diamond 663 64.3 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
27849706 27849706 PRJNA274362_S_NODE_15744_length_227_cov_1.550562_g15624_i0 PRJNA274362 15744 227 1.550562 3.51977574 root 1 Root_unresolved Root_unresolved 84.3 8.85e-19   NR 7SOG_A 5755 g15624 i0 50.7 3.77973568281938 71 35 93.8 0 215 3 28 98 7SOG_A Chain A, Actophorin [Acanthamoeba castellanii] diamond 858 84.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28242464 28242464 PRJNA274362_S_NODE_30206_length_173_cov_1.258065_g30086_i0 PRJNA274362 30206 173 1.258065 2.17645245 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 99.4 8.789999999999999e-23   NR XP_004337281.1 1257118 g30086 i0 84.2 0.988439306358382 57 9 98.8 0 173 3 329 385 XP_004337281.1 calponin domain containing protein [Acanthamoeba castellanii str. Neff] diamond 171 99.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28400522 28400522 PRJNA274362_S_NODE_33626_length_167_cov_0.881356_g33506_i0 PRJNA274362 33626 167 0.881356 1.47186452 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 47 4.26e-4   NR PRP79645.1 1890364 g33506 i0 40 0.988023952095808 55 31 95.2 1 165 7 518 572 PRP79645.1 hypothetical protein PROFUN_10545 [Planoprotostelium fungivorum] diamond 165 47 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
28810583 28810583 PRJNA274362_S_NODE_15328_length_230_cov_1.138122_g15208_i0 PRJNA274362 15328 230 1.138122 2.6176806 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 124 8.81e-34   NR XP_004337603.1 1257118 g15208 i0 81.6 1.98260869565217 76 14 99.1 0 230 3 128 203 XP_004337603.1 ribosomal protein L23, putative [Acanthamoeba castellanii str. Neff] diamond 456 124 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29049820 29049820 PRJNA274362_S_NODE_20748_length_203_cov_1.350649_g20628_i0 PRJNA274362 20748 203 1.350649 2.74181747 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 84.7 3.39e-19   NR XP_003294985.1 5786 g20628 i0 68.3 5.76354679802956 63 20 93.1 0 2 190 36 98 XP_003294985.1 uncharacterized protein DICPUDRAFT_59352 [Dictyostelium purpureum] diamond 1170 84.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
29505481 29505481 PRJNA274362_S_NODE_7010_length_322_cov_2.065934_g6890_i0 PRJNA274362 7010 322 2.065934 6.65230748 Dictyostelium discoideum AX4 352472 Evosea other_Eukaryota 98.2 1.05e-24   NR XP_002649122.1 352472 g6890 i0 88.2 1.42546583850932 51 6 47.5 0 6 158 1 51 XP_002649122.1 60S ribosomal protein L39 [Dictyostelium discoideum AX4] diamond 459 98.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
30073918 30073918 PRJNA274362_S_NODE_35112_length_165_cov_0.896552_g34992_i0 PRJNA274362 35112 165 0.896552 1.4793108 Dictyostelium purpureum 5786 Evosea other_Eukaryota 72.4 3.35e-13   NR XP_003284782.1 5786 g34992 i0 62.3 4.78181818181818 53 20 96.4 0 160 2 208 260 XP_003284782.1 uncharacterized protein DICPUDRAFT_28222 [Dictyostelium purpureum] diamond 789 72.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
30091575 30091575 PRJNA274362_S_NODE_2892_length_483_cov_1.891705_g2773_i0 PRJNA274362 2892 483 1.891705 9.13693515 Entamoeba 5758 Evosea other_Eukaryota 152 2.470000000000001e-44   NR XP_004182885.1 370355 g2773 i0 50.4 1.70186335403727 137 68 85.1 0 470 60 2 138 XP_004182885.1 cofilin, putative [Entamoeba invadens IP1] diamond 822 152 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba invadens
30422002 30422002 PRJNA274362_S_NODE_5313_length_363_cov_1.821656_g5193_i0 PRJNA274362 5313 363 1.821656 6.61261128 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 92.8 1.63e-19   NR KYQ91790.1 361077 g5193 i0 45.8 2 120 59 99.2 2 2 361 169 282 KYQ91790.1 severin [Tieghemostelium lacteum] diamond 726 92.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
30611054 30611054 PRJNA274362_S_NODE_19493_length_208_cov_1.603774_g19373_i0 PRJNA274362 19493 208 1.603774 3.33584992 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 91.3 1.51e-19   NR KAH3758099.1 1580589 g19373 i0 55.9 0.980769230769231 68 30 98.1 0 3 206 284 351 KAH3758099.1 actin binding protein [Pelomyxa schiedti] diamond 204 91.3 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
30674265 30674265 PRJNA274362_S_NODE_25653_length_186_cov_1.386861_g25533_i0 PRJNA274362 25653 186 1.386861 2.57956146 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 57 2.41e-8   NR XP_004348720.1 1257118 g25533 i0 61.2 0.790322580645161 49 19 79 0 1 147 80 128 XP_004348720.1 actin binding protein [Acanthamoeba castellanii str. Neff] diamond 147 57 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30800626 30800626 PRJNA274362_S_NODE_22054_length_198_cov_1.375839_g21934_i0 PRJNA274362 22054 198 1.375839 2.72416122 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 96.3 8.97e-24   NR 1F2K_A 5755 g21934 i0 75.4 0.924242424242424 61 15 92.4 0 197 15 65 125 1F2K_A Chain A, PROFILIN II [Acanthamoeba castellanii] diamond 183 96.3 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30800628 30800628 PRJNA274362_S_NODE_2894_length_483_cov_1.529954_g2775_i0 PRJNA274362 2894 483 1.529954 7.38967782 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 45.4 0.0127   NR KAH3743981.1 1580589 g2775 i0 29 0.813664596273292 131 65 77.6 7 54 428 27 135 KAH3743981.1 hypothetical protein Pelo_14605 [Pelomyxa schiedti] diamond 393 45.4 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
30832322 30832322 PRJNA274362_S_NODE_35874_length_164_cov_0.904348_g35754_i0 PRJNA274362 35874 164 0.904348 1.48313072 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 70.1 3.22e-13   NR PRP82899.1 1890364 g35754 i0 61.5 2.83536585365854 52 20 95.1 0 161 6 87 138 PRP82899.1 hypothetical protein PROFUN_06676 [Planoprotostelium fungivorum] diamond 465 70.1 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
31179567 31179567 PRJNA274362_S_NODE_29375_length_175_cov_1.500000_g29255_i0 PRJNA274362 29375 175 1.5 2.625 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 63.9 8.53e-11   NR KAH3765825.1 1580589 g29255 i0 53.3 1.02857142857143 60 25 97.7 1 5 175 45 104 KAH3765825.1 translationally controlled tumor protein [Pelomyxa schiedti] diamond 180 63.9 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
31401484 31401484 PRJNA274362_S_NODE_13496_length_242_cov_2.134715_g13376_i0 PRJNA274362 13496 242 2.134715 5.1660103 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 97.1 1.0799999999999999e-23   NR 7SOG_A 5755 g13376 i0 62.5 2.72727272727273 72 27 89.3 0 16 231 3 74 7SOG_A Chain A, Actophorin [Acanthamoeba castellanii] diamond 660 97.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32508816 32508816 PRJNA274362_S_NODE_30479_length_172_cov_1.691057_g30359_i0 PRJNA274362 30479 172 1.691057 2.90861804 Dictyostelium discoideum AX4 352472 Evosea other_Eukaryota 78.2 5.3e-16   NR XP_629876.1 352472 g30359 i0 64.3 2.8953488372093 56 20 97.7 0 170 3 43 98 XP_629876.1 S60 ribosomal protein L13 [Dictyostelium discoideum AX4] diamond 498 78.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
32791988 32791988 PRJNA274362_S_NODE_13400_length_243_cov_1.654639_g13280_i0 PRJNA274362 13400 243 1.654639 4.02077277 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 68.9 1.07e-12   NR XP_004348720.1 1257118 g13280 i0 47.4 0.962962962962963 78 35 95.1 2 242 12 58 130 XP_004348720.1 actin binding protein [Acanthamoeba castellanii str. Neff] diamond 234 68.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;