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contig_metadata

19 rows where analysis = "diamond", bioproject = "PRJNA270367" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 19 ✖

bioproject 1

  • PRJNA270367 · 19 ✖

analysis 1

  • diamond · 19 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24596067 24596067 PRJNA270367_P_NODE_17740_length_294_cov_1.232653_g17535_i0 PRJNA270367 17740 294 1.232653 3.62399982 Mimiviridae 549779 Viruses Viruses 93.6 8.71e-20   NR ARF11293.1 1977640 g17535 i0 45.5 2.03061224489796 101 51 99 3 3 293 3 103 ARF11293.1 asparagine synthase [Klosneuvirus KNV1] diamond 597 93.6 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Klosneuvirus Klosneuvirus KNV1
26757371 26757371 PRJNA270367_P_NODE_16001_length_316_cov_1.089888_g15796_i0 PRJNA270367 16001 316 1.089888 3.44404608 Mollivirus kamchatka 2700071 Viruses Viruses 86.3 4.5e-17   NR QHN71019.1 2700071 g15796 i0 41.8 0.930379746835443 98 57 93 0 294 1 185 282 QHN71019.1 hypothetical protein [Mollivirus kamchatka] diamond 294 86.3 1 Viruses               Mollivirus kamchatka
27074017 27074017 PRJNA270367_P_NODE_32782_length_192_cov_1.104895_g32577_i0 PRJNA270367 32782 192 1.104895 2.1213984 phage Lak_Megaphage_RVC_AP1_GC26 3109224 Viruses Viruses 44.3 0.00551   NR WQJ54389.1 3109224 g32577 i0 39.6 0.828125 53 30 79.7 1 168 16 142 194 WQJ54389.1 MAG: nucleotidyltransferase [phage Lak_Megaphage_RVC_AP1_GC26] diamond 159 44.3 1 Viruses Caudoviricetes code 15 clade Heunggongvirae Uroviricota Caudoviricetes       phage Lak_Megaphage_RVC_AP1_GC26
27263817 27263817 PRJNA270367_P_NODE_35003_length_184_cov_1.044444_g34798_i0 PRJNA270367 35003 184 1.044444 1.92177696 Catovirus sp. 'naegleriensis' 3072188 Viruses Viruses 45.1 0.00266   NR CAK7596888.1 3072188 g34798 i0 34.1 1.33695652173913 41 27 66.8 0 7 129 878 918 CAK7596888.1 Ubiquitin-activating enzyme E1 [Catovirus sp. 'naegleriensis'] diamond 246 45.1 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Catovirus Catovirus sp. 'naegleriensis'
27958445 27958445 PRJNA270367_P_NODE_19805_length_272_cov_1.165919_g19600_i0 PRJNA270367 19805 272 1.165919 3.17129968 Fadolivirus algeromassiliense 3060017 Viruses Viruses 46.2 0.00277   NR YP_010804027.1 3060017 g19600 i0 38.2 0.606617647058823 55 31 60.7 1 270 106 146 197 YP_010804027.1 hypothetical protein QKU48_gp1144 [Fadolivirus algeromassiliense] diamond 165 46.2 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Fadolivirus Fadolivirus algeromassiliense
28242442 28242442 PRJNA270367_P_NODE_33906_length_188_cov_0.913669_g33701_i0 PRJNA270367 33906 188 0.913669 1.71769772 Harvfovirus sp. 2487768 Viruses Viruses 51.6 1.32e-5   NR AYV80981.1 2487768 g33701 i0 46.9 0.781914893617021 49 26 78.2 0 179 33 246 294 AYV80981.1 MAG: chromosome condensation regulator [Harvfovirus sp.] diamond 147 51.6 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Harvfovirus sp.
29316131 29316131 PRJNA270367_P_NODE_8229_length_468_cov_2.474940_g8030_i0 PRJNA270367 8229 468 2.47494 11.5827192 Bodo saltans virus 2024608 Viruses Viruses 50.4 7.17e-4   NR YP_010778267.1 2024608 g8030 i0 50 0.538461538461538 42 21 26.9 0 287 412 509 550 YP_010778267.1 asparagine synthetase B [Bodo saltans virus] diamond 252 50.4 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Theiavirus Theiavirus salishense
29568648 29568648 PRJNA270367_P_NODE_27130_length_218_cov_1.076923_g26925_i0 PRJNA270367 27130 218 1.076923 2.34769214 Catovirus sp. 'naegleriensis' 3072188 Viruses Viruses 66.2 1.38e-10   NR CAK7597024.1 3072188 g26925 i0 48.6 1.98165137614679 72 36 99.1 1 3 218 57 127 CAK7597024.1 Asparagine synthase, glutamine-hydrolyzing [Catovirus sp. 'naegleriensis'] diamond 432 66.2 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Catovirus Catovirus sp. 'naegleriensis'
29600047 29600047 PRJNA270367_P_NODE_39370_length_169_cov_1.300000_g39165_i0 PRJNA270367 39370 169 1.3 2.197 Terrestrivirus sp. 2487775 Viruses Viruses 55.8 3.15e-7   NR AYV75160.1 2487775 g39165 i0 57.1 0.745562130177515 42 18 74.6 0 129 4 257 298 AYV75160.1 MAG: hypothetical protein Terrestrivirus1_34 [Terrestrivirus sp.] diamond 126 55.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Terrestrivirus sp.
29947727 29947727 PRJNA270367_P_NODE_2211_length_940_cov_2.510662_g2046_i0 PRJNA270367 2211 940 2.510662 23.6002228 Orpheovirus IHUMI-LCC2 2023057 Viruses Viruses 138 3.1699999999999996e-32   NR YP_009449258.1 2023057 g2046 i0 41.2 0.673404255319149 211 107 65.4 7 687 73 13 212 YP_009449258.1 Domain of unknown function (DUF4114) [Orpheovirus IHUMI-LCC2] diamond 633 138 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Orpheoviridae Alphaorpheovirus Alphaorpheovirus massiliense
30073914 30073914 PRJNA270367_P_NODE_6892_length_516_cov_1.218415_g6694_i0 PRJNA270367 6892 516 1.218415 6.2870214 Barrevirus sp. 2487763 Viruses Viruses 72.8 4.06e-12   NR AYV77273.1 2487763 g6694 i0 25.3 0.918604651162791 158 114 91.9 3 38 511 9 162 AYV77273.1 MAG: START domain containing protein [Barrevirus sp.] diamond 474 72.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Barrevirus sp.
30263932 30263932 PRJNA270367_P_NODE_35992_length_180_cov_1.587786_g35787_i0 PRJNA270367 35992 180 1.587786 2.8580148 Saccharomyces paradoxus virus L-A-1939 2048540 Viruses Viruses 75.1 6.17e-14   NR ATL63188.1 2048540 g35787 i0 61 0.983333333333333 59 23 98.3 0 3 179 818 876 ATL63188.1 gag-pol fusion protein [Saccharomyces paradoxus virus L-A-1939] diamond 177 75.1 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Saccharomyces paradoxus virus L-A-1939
30674260 30674260 PRJNA270367_P_NODE_8773_length_452_cov_1.734491_g8574_i0 PRJNA270367 8773 452 1.734491 7.83989932 Klosneuvirus KNV1 1977640 Viruses Viruses 155 4.99e-42   NR ARF12058.1 1977640 g8574 i0 57.6 1.74557522123894 132 54 87.6 1 1 396 333 462 ARF12058.1 aminotransferase class-III [Klosneuvirus KNV1] diamond 789 155 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Klosneuvirus Klosneuvirus KNV1
30705828 30705828 PRJNA270367_P_NODE_20094_length_269_cov_1.159091_g19889_i0 PRJNA270367 20094 269 1.159091 3.11795479 Terrestrivirus sp. 2487775 Viruses Viruses 45.8 9.91e-4   NR AYV76392.1 2487775 g19889 i0 50 0.557620817843866 50 23 53.5 1 235 92 1 50 AYV76392.1 MAG: hypothetical protein Terrestrivirus6_18 [Terrestrivirus sp.] diamond 150 45.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Terrestrivirus sp.
30737427 30737427 PRJNA270367_P_NODE_45574_length_163_cov_0.912281_g45369_i0 PRJNA270367 45574 163 0.912281 1.48701803 Pseudomonas phage PaBG 1335230 Viruses Viruses 58.2 6.96e-9   NR YP_008433468.1 1335230 g45369 i0 52.3 0.809815950920245 44 21 81 0 4 135 90 133 YP_008433468.1 hypothetical protein O152_gp138 [Pseudomonas phage PaBG] diamond 132 58.2 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Baikalvirus Baikalvirus PaBG
30850012 30850012 PRJNA270367_P_NODE_38794_length_171_cov_0.827869_g38589_i0 PRJNA270367 38794 171 0.827869 1.41565599 Cotonvirus 3044693 Viruses Viruses 51.6 1.03e-5   NR QHN71019.1 2700071 g38589 i0 44.4 2.94736842105263 54 30 94.7 0 2 163 246 299 QHN71019.1 hypothetical protein [Mollivirus kamchatka] diamond 504 51.6 1 Viruses               Mollivirus kamchatka
31147862 31147862 PRJNA270367_P_NODE_24235_length_235_cov_1.112903_g24030_i0 PRJNA270367 24235 235 1.112903 2.61532205 Urbanus proteus nucleopolyhedrovirus 1675866 Viruses Viruses 45.1 0.0048   NR YP_009250095.1 1675866 g24030 i0 42.1 0.727659574468085 57 25 62.6 1 36 182 249 305 YP_009250095.1 BRO-F [Urbanus proteus nucleopolyhedrovirus] diamond 171 45.1 1 Viruses       Naldaviricetes Lefavirales Baculoviridae Alphabaculovirus Alphabaculovirus urprotei
32160680 32160680 PRJNA270367_P_NODE_46438_length_162_cov_0.920354_g46233_i0 PRJNA270367 46438 162 0.920354 1.49097348 Caudoviricetes sp. 2832643 Viruses Viruses 86.3 1.35e-19   NR XOR53229.1 2832643 g46233 i0 88.7 0.981481481481482 53 6 98.1 0 161 3 96 148 XOR53229.1 MAG: hypothetical protein [Caudoviricetes sp.] diamond 159 86.3 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
32571998 32571998 PRJNA270367_P_NODE_20359_length_266_cov_1.364055_g20154_i0 PRJNA270367 20359 266 1.364055 3.6283863 Edafosvirus sp. 2487765 Viruses Viruses 104 4.8e-24   NR AYV78014.1 2487765 g20154 i0 55.2 0.981203007518797 87 38 98.1 1 1 261 182 267 AYV78014.1 MAG: elongation factor 1 alpha long form [Edafosvirus sp.] diamond 261 104 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Edafosvirus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;