RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA270367" and tax_phylum = "Uroviricota"

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tax_superkingdom 1

tax_phylum 1

  • Uroviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA270367 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27074017 27074017 PRJNA270367_P_NODE_32782_length_192_cov_1.104895_g32577_i0 PRJNA270367 32782 192 1.104895 2.1213984 phage Lak_Megaphage_RVC_AP1_GC26 3109224 Viruses Viruses 44.3 0.00551   NR WQJ54389.1 3109224 g32577 i0 39.6 0.828125 53 30 79.7 1 168 16 142 194 WQJ54389.1 MAG: nucleotidyltransferase [phage Lak_Megaphage_RVC_AP1_GC26] diamond 159 44.3 1 Viruses Caudoviricetes code 15 clade Heunggongvirae Uroviricota Caudoviricetes       phage Lak_Megaphage_RVC_AP1_GC26
30737427 30737427 PRJNA270367_P_NODE_45574_length_163_cov_0.912281_g45369_i0 PRJNA270367 45574 163 0.912281 1.48701803 Pseudomonas phage PaBG 1335230 Viruses Viruses 58.2 6.96e-9   NR YP_008433468.1 1335230 g45369 i0 52.3 0.809815950920245 44 21 81 0 4 135 90 133 YP_008433468.1 hypothetical protein O152_gp138 [Pseudomonas phage PaBG] diamond 132 58.2 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Baikalvirus Baikalvirus PaBG
32160680 32160680 PRJNA270367_P_NODE_46438_length_162_cov_0.920354_g46233_i0 PRJNA270367 46438 162 0.920354 1.49097348 Caudoviricetes sp. 2832643 Viruses Viruses 86.3 1.35e-19   NR XOR53229.1 2832643 g46233 i0 88.7 0.981481481481482 53 6 98.1 0 161 3 96 148 XOR53229.1 MAG: hypothetical protein [Caudoviricetes sp.] diamond 159 86.3 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;