RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA263496" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA263496 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28432093 28432093 PRJNA263496_P_NODE_25026_length_162_cov_0.902655_g24773_i0 PRJNA263496 25026 162 0.902655 1.4623011 Hesseltinella vesiculosa 101127 Fungi Fungi 69.3 4.69e-12   NR ORX59461.1 101127 g24773 i0 66 1.85185185185185 50 17 92.6 0 11 160 136 185 ORX59461.1 60S ribosomal protein L3 [Hesseltinella vesiculosa] diamond 300 69.3 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Cunninghamellaceae Hesseltinella Hesseltinella vesiculosa
31861655 31861655 PRJNA263496_P_NODE_14777_length_203_cov_1.376623_g14524_i0 PRJNA263496 14777 203 1.376623 2.79454469 Fungi 4751 Fungi Fungi 83.2 1.24e-16   NR CAG8601089.1 144539 g14524 i0 55.2 7.77339901477832 67 28 96.1 1 195 1 220 286 CAG8601089.1 3576_t:CDS:10, partial [Paraglomus occultum] diamond 1578 83.6 0.995215311004785 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Paraglomerales Paraglomeraceae Paraglomus Paraglomus occultum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;