RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA263496" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA263496 · 7 ✖

analysis 1

  • diamond · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5472357 5472357 PRJNA263496_P_NODE_1105_length_883_cov_1.949640_g959_i0 PRJNA263496 1105 883 1.94964 17.2153212 Fungi 4751 Fungi Fungi 371 1.28e-123   NR NP_594440.1 4896 g959 i0 60.2 112.984144960362 294 112 99.9 1 882 1 4 292 NP_594440.1 translation elongation factor EF-1 alpha Ef1a-b [Schizosaccharomyces pombe] diamond 99765 374 0.991978609625668 Eukaryota Opisthokonta Fungi Ascomycota Schizosaccharomycetes Schizosaccharomycetales Schizosaccharomycetaceae Schizosaccharomyces Schizosaccharomyces pombe
9297071 9297071 PRJNA263496_P_NODE_12168_length_224_cov_2.485714_g11915_i0 PRJNA263496 12168 224 2.485714 5.56799936 Opisthokonta 33154 Fungi Fungi 113 7.9e-30   NR KAJ1337677.1 5520 g11915 i0 80.3 869.008928571429 66 13 88.4 0 3 200 110 175 KAJ1337677.1 histone H4 [Microdochium nivale] diamond 194658 114 0.991228070175439 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Xylariales Microdochiaceae Microdochium Microdochium nivale
29473701 29473701 PRJNA263496_P_NODE_22470_length_165_cov_0.879310_g22217_i0 PRJNA263496 22470 165 0.87931 1.4508615 Cladosporium halotolerans 1052096 Fungi Fungi 53.1 2.67e-6   NR XP_069232173.1 1052096 g22217 i0 59.3 0.981818181818182 54 3 98.2 1 3 164 4 38 XP_069232173.1 uncharacterized protein WHR41_02285 [Cladosporium halotolerans] diamond 162 53.1 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium halotolerans
29789579 29789579 PRJNA263496_P_NODE_24331_length_163_cov_0.894737_g24078_i0 PRJNA263496 24331 163 0.894737 1.45842131 Plenodomus tracheiphilus IPT5 1408161 Fungi Fungi 120 5.54e-33   NR KAF2851163.1 1408161 g24078 i0 98.1 2.92638036809816 53 1 97.5 0 159 1 86 138 KAF2851163.1 AN1-type zinc finger protein-like protein [Plenodomus tracheiphilus IPT5] diamond 477 120 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Leptosphaeriaceae Plenodomus Plenodomus tracheiphilus
30421958 30421958 PRJNA263496_P_NODE_13453_length_213_cov_1.451220_g13200_i0 PRJNA263496 13453 213 1.45122 3.0910986 Fusarium flagelliforme 2675880 Fungi Fungi 42.4 0.0322   NR XP_045977701.1 2675880 g13200 i0 32.7 0.732394366197183 52 35 73.2 0 164 9 45 96 XP_045977701.1 uncharacterized protein B0J16DRAFT_389244 [Fusarium flagelliforme] diamond 156 42.4 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Nectriaceae Fusarium Fusarium flagelliforme
32273338 32273338 PRJNA263496_P_NODE_20358_length_170_cov_1.685950_g20105_i0 PRJNA263496 20358 170 1.68595 2.866115 Fungi 4751 Fungi Fungi 74.7 9.04e-15   NR EFQ91734.1 861557 g20105 i0 61.8 14.4882352941176 55 21 97.1 0 168 4 54 108 EFQ91734.1 hypothetical protein PTT_11324 [Pyrenophora teres f. teres 0-1] diamond 2463 75.1 0.994673768308922 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Pleosporaceae Pyrenophora Pyrenophora teres
32305061 32305061 PRJNA263496_P_NODE_23219_length_164_cov_0.886957_g22966_i0 PRJNA263496 23219 164 0.886957 1.45460948 Eukaryota 2759 Fungi Fungi 40.8 0.0479   NR KAG9802206.1 46634 g22966 i0 67.9 2.70731707317073 28 9 51.2 0 88 5 137 164 KAG9802206.1 eukaryotic translation initiation factor 3, partial [Aureobasidium melanogenum] diamond 444 41.2 0.990291262135922 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Dothideales Saccotheciaceae Aureobasidium Aureobasidium melanogenum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;