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contig_metadata

16 rows where analysis = "diamond", bioproject = "PRJNA255848" and tax_clade = "Embryophyta"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Embryophyta · 16 ✖

bioproject 1

  • PRJNA255848 · 16 ✖

analysis 1

  • diamond · 16 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1057043 1057043 PRJNA255848_P_NODE_41021_length_164_cov_0.886957_g40703_i0 PRJNA255848 41021 164 0.886957 1.45460948 Magnoliopsida 3398 Plants Plants 96.7 5.2e-22   NR XP_012838598.1 4155 g40703 i0 79.6 55.2073170731707 54 11 98.8 0 163 2 106 159 XP_012838598.1 PREDICTED: S-adenosylmethionine synthase 3-like [Erythranthe guttata] diamond 9054 97.4 0.992813141683778 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Phrymaceae Erythranthe Erythranthe guttata
26806982 26806982 PRJNA255848_P_NODE_34621_length_168_cov_1.285714_g34303_i0 PRJNA255848 34621 168 1.285714 2.15999952 Solanum 4107 Plants Plants 41.2 0.0498   NR XP_004251482.2 4081 g34303 i0 40 1.60714285714286 45 24 80.4 1 156 22 181 222 XP_004251482.2 G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 isoform X2 [Solanum lycopersicum] diamond 270 41.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Solanum Solanum lycopersicum
28148010 28148010 PRJNA255848_P_NODE_28205_length_187_cov_2.217391_g27887_i0 PRJNA255848 28205 187 2.217391 4.14652117 Manihot esculenta 3983 Plants Plants 45.4 0.00203   NR XP_021627861.1 3983 g27887 i0 47.3 0.882352941176471 55 28 86.6 1 25 186 563 617 XP_021627861.1 putative disease resistance RPP13-like protein 1 [Manihot esculenta] diamond 165 45.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malpighiales Euphorbiaceae Manihot Manihot esculenta
28354978 28354978 PRJNA255848_P_NODE_42046_length_164_cov_0.886957_g41728_i0 PRJNA255848 42046 164 0.886957 1.45460948 Eukaryota 2759 Plants Plants 109 4.49e-26   NR RZC75482.1 3469 g41728 i0 98.1 657.823170731707 54 1 98.8 0 163 2 245 298 RZC75482.1 hypothetical protein C5167_050971 [Papaver somniferum] diamond 107883 110 0.990909090909091 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Ranunculales Papaveraceae Papaver Papaver somniferum
28463756 28463756 PRJNA255848_P_NODE_27666_length_189_cov_1.457143_g27348_i0 PRJNA255848 27666 189 1.457143 2.75400027 Fraxinus pennsylvanica 56036 Plants Plants 124 1.26e-32   NR CAI9777652.1 56036 g27348 i0 95.2 0.984126984126984 62 3 98.4 0 2 187 253 314 CAI9777652.1 unnamed protein product [Fraxinus pennsylvanica] diamond 186 124 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Oleaceae Fraxinus Fraxinus pennsylvanica
28923258 28923258 PRJNA255848_P_NODE_33008_length_172_cov_2.065041_g32690_i0 PRJNA255848 33008 172 2.065041 3.55187052 Eukaryota 2759 Plants Plants 126 4.9e-36   NR KAG0582699.1 3225 g32690 i0 98.2 559.343023255814 56 1 97.7 0 170 3 33 88 KAG0582699.1 hypothetical protein KC19_3G078100 [Ceratodon purpureus] diamond 96207 127 0.992125984251969 Eukaryota Embryophyta Viridiplantae Streptophyta Bryopsida Pseudoditrichales Ditrichaceae Ceratodon Ceratodon purpureus
29081333 29081333 PRJNA255848_P_NODE_46468_length_161_cov_1.821429_g46150_i0 PRJNA255848 46468 161 1.821429 2.93250069 Magnoliopsida 3398 Plants Plants 45.8 9.97e-4   NR PPD73807.1 3634 g46150 i0 63.6 1.69565217391304 33 12 61.5 0 156 58 425 457 PPD73807.1 hypothetical protein GOBAR_DD29264 [Gossypium barbadense] diamond 273 45.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malvales Malvaceae Gossypium Gossypium barbadense
29680827 29680827 PRJNA255848_P_NODE_25350_length_198_cov_1.026846_g25032_i0 PRJNA255848 25350 198 1.026846 2.03315508 root 1 Root_unresolved Root_unresolved 120 2.28e-33   NR XP_021895162.1 3649 g25032 i0 96.9 322.015151515152 65 2 98.5 0 3 197 37 101 XP_021895162.1 probable histone H2A variant 3 [Carica papaya] diamond 63759 121 0.991735537190083 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Caricaceae Carica Carica papaya
29870618 29870618 PRJNA255848_P_NODE_32491_length_174_cov_1.408000_g32173_i0 PRJNA255848 32491 174 1.408 2.44992 root 1 Root_unresolved Root_unresolved 110 2.12e-29   NR KAH9761975.1 2711 g32173 i0 98.3 401 58 1 100 0 1 174 38 95 KAH9761975.1 putative histone H2A variant 3 [Citrus sinensis] diamond 69774 111 0.990990990990991 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Sapindales Rutaceae Citrus Citrus sinensis
29884632 29884632 PRJNA255848_P_NODE_11531_length_302_cov_1.071146_g11213_i0 PRJNA255848 11531 302 1.071146 3.23486092 Dillenia turbinata 194707 Plants Plants 43.5 0.0374   NR KAK6915059.1 194707 g11213 i0 31.3 0.635761589403974 64 41 63.6 1 85 276 140 200 KAK6915059.1 Fatty acid desaturase domain [Dillenia turbinata] diamond 192 43.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Dilleniales Dilleniaceae Dillenia Dillenia turbinata
29933973 29933973 PRJNA255848_P_NODE_29931_length_182_cov_1.150376_g29613_i0 PRJNA255848 29931 182 1.150376 2.09368432 root 1 Root_unresolved Root_unresolved 52 8.8e-6   NR KAH9771515.1 2711 g29613 i0 100 174.016483516484 24 0 39.6 0 2 73 370 393 KAH9771515.1 eukaryotic initiation factor 4A-III [Citrus sinensis] diamond 31671 52 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Sapindales Rutaceae Citrus Citrus sinensis
29965470 29965470 PRJNA255848_P_NODE_40171_length_165_cov_0.879310_g39853_i0 PRJNA255848 40171 165 0.87931 1.4508615 Eukaryota 2759 Plants Plants 87 2.58e-19   NR KAG0588237.1 3225 g39853 i0 83.6 41.9454545454545 55 9 100 0 1 165 120 174 KAG0588237.1 hypothetical protein KC19_2G227900 [Ceratodon purpureus] diamond 6921 87 1 Eukaryota Embryophyta Viridiplantae Streptophyta Bryopsida Pseudoditrichales Ditrichaceae Ceratodon Ceratodon purpureus
30281746 30281746 PRJNA255848_P_NODE_47092_length_161_cov_0.910714_g46774_i0 PRJNA255848 47092 161 0.910714 1.46624954 Eukaryota 2759 Plants Plants 45.1 0.00189   NR KAJ3678193.1 13579 g46774 i0 38.5 4.28571428571429 52 32 96.9 0 157 2 213 264 KAJ3678193.1 hypothetical protein LUZ60_001996 [Juncus effusus] diamond 690 45.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Juncaceae Juncus Juncus effusus
31369838 31369838 PRJNA255848_P_NODE_29236_length_184_cov_1.133333_g28918_i0 PRJNA255848 29236 184 1.133333 2.08533272 Linum trigynum 586398 Plants Plants 56.2 5.27e-8   NR CAL1366671.1 586398 g28918 i0 73 12.6684782608696 37 10 60.3 0 182 72 86 122 CAL1366671.1 unnamed protein product [Linum trigynum] diamond 2331 56.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malpighiales Linaceae Linum Linum trigynum
31938818 31938818 PRJNA255848_P_NODE_11197_length_307_cov_1.976744_g10879_i0 PRJNA255848 11197 307 1.976744 6.06860408 Nicotiana tomentosiformis 4098 Plants Plants 43.5 0.0224   NR XP_070057319.1 4098 g10879 i0 35.9 0.625407166123778 64 40 62.5 1 105 296 104 166 XP_070057319.1 uncharacterized protein [Nicotiana tomentosiformis] diamond 192 43.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Nicotiana Nicotiana tomentosiformis
32255757 32255757 PRJNA255848_P_NODE_12298_length_290_cov_1.269710_g11980_i0 PRJNA255848 12298 290 1.26971 3.682159 Adiantum nelumboides 2759587 Plants Plants 46.2 0.00382   NR MCO5602264.1 2759587 g11980 i0 43.6 1.70689655172414 55 28 53.8 1 50 205 172 226 MCO5602264.1 hypothetical protein [Adiantum nelumboides] diamond 495 46.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Polypodiopsida Polypodiales Pteridaceae Adiantum Adiantum nelumboides

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;