contig_metadata
5 rows where analysis = "diamond", bioproject = "PRJNA242641" and tax_phylum = "Pseudomonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23319488 | 23319488 | PRJNA242641_S_NODE_39_length_973_cov_9.208686_g34_i0 | PRJNA242641 | 39 | 973 | 9.208686 | 89.60051478 | Ralstonia pickettii OR214 | 1264675 | Bacteria | Bacteria | 451 | 3.04e-154 | NR | ENZ77661.1 | 1264675 | g34 | i0 | 95.7 | 0.724563206577595 | 235 | 10 | 72.5 | 0 | 229 | 933 | 1 | 235 | ENZ77661.1 hypothetical protein OR214_02664 [Ralstonia pickettii OR214] | diamond | 705 | 451 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Ralstonia | Ralstonia pickettii | ||
| 28400448 | 28400448 | PRJNA242641_S_NODE_1966_length_166_cov_4.364964_g1938_i0 | PRJNA242641 | 1966 | 166 | 4.364964 | 7.24584024 | Paracoccus spongiarum | 3064387 | Bacteria | Bacteria | 42.7 | 0.00584 | NR | WP_305962362.1 | 3064387 | g1938 | i0 | 45.7 | 0.831325301204819 | 46 | 25 | 83.1 | 0 | 22 | 159 | 53 | 98 | WP_305962362.1 YraN family protein [Paracoccus spongiarum] | diamond | 138 | 42.7 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Alphaproteobacteria | Rhodobacterales | Paracoccaceae | Paracoccus | Paracoccus spongiarum | ||
| 29473682 | 29473682 | PRJNA242641_S_NODE_2450_length_150_cov_6.694215_g2422_i0 | PRJNA242641 | 2450 | 150 | 6.694215 | 10.0413225 | Ralstonia solanacearum | 305 | Bacteria | Bacteria | 79 | 1.35e-15 | NR | WP_064297723.1 | 305 | g2422 | i0 | 71.4 | 0.98 | 49 | 14 | 98 | 0 | 148 | 2 | 171 | 219 | WP_064297723.1 zonular occludens toxin domain-containing protein [Ralstonia solanacearum] | diamond | 147 | 79 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Ralstonia | Ralstonia solanacearum | ||
| 30723594 | 30723594 | PRJNA242641_S_NODE_1914_length_168_cov_2.604317_g1886_i0 | PRJNA242641 | 1914 | 168 | 2.604317 | 4.37525256 | Ralstonia | 48736 | Bacteria | Bacteria | 120 | 6.299999999999999e-31 | NR | WP_296360505.1 | 54061 | g1886 | i0 | 98.2 | 2 | 56 | 1 | 100 | 0 | 1 | 168 | 74 | 129 | WP_296360505.1 zonular occludens toxin domain-containing protein [Ralstonia sp.] | diamond | 336 | 120 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Ralstonia | Ralstonia sp. | ||
| 32192154 | 32192154 | PRJNA242641_S_NODE_998_length_231_cov_7.806931_g970_i0 | PRJNA242641 | 998 | 231 | 7.806931 | 18.03401061 | uncultured Ralstonia sp. | 114715 | Bacteria | Bacteria | 45.8 | 2.76e-4 | NR | WP_298938061.1 | 114715 | g970 | i0 | 60 | 0.779220779220779 | 60 | 19 | 77.9 | 2 | 50 | 229 | 1 | 55 | WP_298938061.1 major capsid protein [uncultured Ralstonia sp.] | diamond | 180 | 45.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Ralstonia | uncultured Ralstonia sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;