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contig_metadata

24 rows where analysis = "diamond" and bioproject = "PRJNA242641"

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tax_phylum 3

tax_kingdom 3

tax_superkingdom 2

tax_clade 1

bioproject 1

  • PRJNA242641 · 24 ✖

analysis 1

  • diamond · 24 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4194529 4194529 PRJNA242641_S_NODE_1664_length_179_cov_3.406667_g1636_i0 PRJNA242641 1664 179 3.406667 6.09793393 root 1 Root_unresolved Root_unresolved 84.7 1e-19   NR MBO8630984.1 1280 g1636 i0 79.7 6.90502793296089 59 12 98.9 0 179 3 17 75 MBO8630984.1 hypothetical protein [Staphylococcus aureus] diamond 1236 85.5 0.990643274853801 Bacteria   Bacillati Bacillota Bacilli Bacillales Staphylococcaceae Staphylococcus Staphylococcus aureus
22044014 22044014 PRJNA242641_S_NODE_1618_length_182_cov_2.163399_g1590_i0 PRJNA242641 1618 182 2.163399 3.93738618 Macadamia integrifolia 60698 Plants Plants 94.4 7.06e-22   NR XP_042482877.1 60698 g1590 i0 78 1.92857142857143 59 13 97.3 0 4 180 119 177 XP_042482877.1 bidirectional sugar transporter SWEET4-like [Macadamia integrifolia] diamond 351 94.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Proteales Proteaceae Macadamia Macadamia integrifolia
23319488 23319488 PRJNA242641_S_NODE_39_length_973_cov_9.208686_g34_i0 PRJNA242641 39 973 9.208686 89.60051478 Ralstonia pickettii OR214 1264675 Bacteria Bacteria 451 3.04e-154   NR ENZ77661.1 1264675 g34 i0 95.7 0.724563206577595 235 10 72.5 0 229 933 1 235 ENZ77661.1 hypothetical protein OR214_02664 [Ralstonia pickettii OR214] diamond 705 451 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Ralstonia Ralstonia pickettii
27786888 27786888 PRJNA242641_S_NODE_2384_length_152_cov_2.926829_g2356_i0 PRJNA242641 2384 152 2.926829 4.44878008 Eukaryota 2759 Plants Plants 98.2 4.539999999999999e-23   NR KRH10324.2 3847 g2356 i0 98 55.1447368421053 49 1 96.7 0 1 147 226 274 KRH10324.2 hypothetical protein GLYMA_15G042100v4 [Glycine max] diamond 8382 98.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Glycine Glycine max
27832054 27832054 PRJNA242641_S_NODE_1824_length_172_cov_1.909091_g1796_i0 PRJNA242641 1824 172 1.909091 3.28363652 Cinnamomum micranthum f. kanehirae 337451 Plants Plants 119 4.75e-32   NR RWR87517.1 337451 g1796 i0 94.7 0.994186046511628 57 3 99.4 0 171 1 126 182 RWR87517.1 hypothetical protein CKAN_01646200 [Cinnamomum micranthum f. kanehirae] diamond 171 119 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Laurales Lauraceae Cinnamomum Cinnamomum micranthum
27863592 27863592 PRJNA242641_S_NODE_1805_length_173_cov_2.263889_g1777_i0 PRJNA242641 1805 173 2.263889 3.91652797 Morus notabilis 981085 Plants Plants 60.8 9.46e-10   NR EXB22120.1 981085 g1777 i0 51.7 7.47398843930636 58 25 95.4 1 170 6 9 66 EXB22120.1 hypothetical protein L484_002434 [Morus notabilis] diamond 1293 60.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Moraceae Morus Morus notabilis
27863593 27863593 PRJNA242641_S_NODE_2425_length_151_cov_3.049180_g2397_i0 PRJNA242641 2425 151 3.04918 4.6042618 Nyssa sinensis 561372 Plants Plants 55.1 3.11e-7   NR KAA8548089.1 561372 g2397 i0 79.3 0.576158940397351 29 6 57.6 0 3 89 204 232 KAA8548089.1 hypothetical protein F0562_004650 [Nyssa sinensis] diamond 87 55.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Cornales Nyssaceae Nyssa Nyssa sinensis
28116175 28116175 PRJNA242641_S_NODE_865_length_247_cov_2.564220_g837_i0 PRJNA242641 865 247 2.56422 6.3336234 Cinnamomum micranthum f. kanehirae 337451 Plants Plants 137 7.46e-38   NR RWR90609.1 337451 g837 i0 98.4 0.765182186234818 63 1 76.5 0 2 190 234 296 RWR90609.1 class I chitinase [Cinnamomum micranthum f. kanehirae] diamond 189 137 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Laurales Lauraceae Cinnamomum Cinnamomum micranthum
28147993 28147993 PRJNA242641_S_NODE_2385_length_152_cov_2.731707_g2357_i0 PRJNA242641 2385 152 2.731707 4.15219464 Coptis chinensis 261450 Plants Plants 41.2 0.00899   NR KAF9609808.1 261450 g2357 i0 52.4 2.76315789473684 42 20 82.9 0 128 3 25 66 KAF9609808.1 hypothetical protein IFM89_018662 [Coptis chinensis] diamond 420 41.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Ranunculales Ranunculaceae Coptis Coptis chinensis
28305698 28305698 PRJNA242641_S_NODE_2466_length_150_cov_2.347107_g2438_i0 PRJNA242641 2466 150 2.347107 3.5206605 Cinnamomum micranthum f. kanehirae 337451 Plants Plants 83.2 4.41e-18   NR RWR87517.1 337451 g2438 i0 89.8 0.98 49 5 98 0 3 149 67 115 RWR87517.1 hypothetical protein CKAN_01646200 [Cinnamomum micranthum f. kanehirae] diamond 147 83.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Laurales Lauraceae Cinnamomum Cinnamomum micranthum
28400448 28400448 PRJNA242641_S_NODE_1966_length_166_cov_4.364964_g1938_i0 PRJNA242641 1966 166 4.364964 7.24584024 Paracoccus spongiarum 3064387 Bacteria Bacteria 42.7 0.00584   NR WP_305962362.1 3064387 g1938 i0 45.7 0.831325301204819 46 25 83.1 0 22 159 53 98 WP_305962362.1 YraN family protein [Paracoccus spongiarum] diamond 138 42.7 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Rhodobacterales Paracoccaceae Paracoccus Paracoccus spongiarum
28873992 28873992 PRJNA242641_S_NODE_2348_length_153_cov_2.306452_g2320_i0 PRJNA242641 2348 153 2.306452 3.52887156 Macadamia integrifolia 60698 Plants Plants 73.9 7.5e-15   NR XP_042492697.1 60698 g2320 i0 64 2.86274509803922 50 18 98 0 3 152 37 86 XP_042492697.1 anther-specific protein LAT52-like [Macadamia integrifolia] diamond 438 73.9 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Proteales Proteaceae Macadamia Macadamia integrifolia
29473682 29473682 PRJNA242641_S_NODE_2450_length_150_cov_6.694215_g2422_i0 PRJNA242641 2450 150 6.694215 10.0413225 Ralstonia solanacearum 305 Bacteria Bacteria 79 1.35e-15   NR WP_064297723.1 305 g2422 i0 71.4 0.98 49 14 98 0 148 2 171 219 WP_064297723.1 zonular occludens toxin domain-containing protein [Ralstonia solanacearum] diamond 147 79 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Ralstonia Ralstonia solanacearum
29870614 29870614 PRJNA242641_S_NODE_431_length_356_cov_5.113150_g403_i0 PRJNA242641 431 356 5.11315 18.202814 Magnoliopsida 3398 Plants Plants 75.1 2.71e-15   NR XP_011033291.1 75702 g403 i0 69 3.93539325842697 58 18 48.9 0 268 95 1 58 XP_011033291.1 PREDICTED: arabinogalactan peptide 23-like [Populus euphratica] diamond 1401 75.5 0.994701986754967 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malpighiales Salicaceae Populus Populus euphratica
30439493 30439493 PRJNA242641_S_NODE_333_length_397_cov_4.236413_g305_i0 PRJNA242641 333 397 4.236413 16.81855961 Escallonia 23075 Plants Plants 75.1 2.75e-13   NR KAK2977287.1 112253 g305 i0 50 1.05793450881612 70 35 52.9 0 319 110 154 223 KAK2977287.1 hypothetical protein RJ640_013052 [Escallonia rubra] diamond 420 75.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Escalloniales Escalloniaceae Escallonia Escallonia rubra
30723594 30723594 PRJNA242641_S_NODE_1914_length_168_cov_2.604317_g1886_i0 PRJNA242641 1914 168 2.604317 4.37525256 Ralstonia 48736 Bacteria Bacteria 120 6.299999999999999e-31   NR WP_296360505.1 54061 g1886 i0 98.2 2 56 1 100 0 1 168 74 129 WP_296360505.1 zonular occludens toxin domain-containing protein [Ralstonia sp.] diamond 336 120 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Ralstonia Ralstonia sp.
31021900 31021900 PRJNA242641_S_NODE_715_length_272_cov_3.144033_g687_i0 PRJNA242641 715 272 3.144033 8.5517697600000009 Tripterygium wilfordii 458696 Plants Plants 80.9 6.93e-18   NR KAF5736885.1 458696 g687 i0 51.4 0.772058823529412 70 33 77.2 1 8 217 1 69 KAF5736885.1 hypothetical protein HS088_TW14G01040 [Tripterygium wilfordii] diamond 210 80.9 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Celastrales Celastraceae Tripterygium Tripterygium wilfordii
31798301 31798301 PRJNA242641_S_NODE_617_length_293_cov_2.890152_g589_i0 PRJNA242641 617 293 2.890152 8.46814536 Magnoliopsida 3398 Plants Plants 41.6 0.032   NR CAN75584.1 29760 g589 i0 50 0.614334470989761 32 16 32.8 0 291 196 36 67 CAN75584.1 hypothetical protein VITISV_017139 [Vitis vinifera] diamond 180 41.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Vitales Vitaceae Vitis Vitis vinifera
32065440 32065440 PRJNA242641_S_NODE_418_length_360_cov_5.253776_g390_i0 PRJNA242641 418 360 5.253776 18.9135936 Escallonia herrerae 1293975 Plants Plants 72 1.88e-13   NR KAK3024565.1 1293975 g390 i0 48.6 1.16666666666667 70 36 58.3 0 79 288 23 92 KAK3024565.1 hypothetical protein RJ639_043505 [Escallonia herrerae] diamond 420 72 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Escalloniales Escalloniaceae Escallonia Escallonia herrerae
32192154 32192154 PRJNA242641_S_NODE_998_length_231_cov_7.806931_g970_i0 PRJNA242641 998 231 7.806931 18.03401061 uncultured Ralstonia sp. 114715 Bacteria Bacteria 45.8 2.76e-4   NR WP_298938061.1 114715 g970 i0 60 0.779220779220779 60 19 77.9 2 50 229 1 55 WP_298938061.1 major capsid protein [uncultured Ralstonia sp.] diamond 180 45.8 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Ralstonia uncultured Ralstonia sp.
32287308 32287308 PRJNA242641_S_NODE_2039_length_163_cov_3.171642_g2011_i0 PRJNA242641 2039 163 3.171642 5.16977646 Papaver bracteatum 215227 Plants Plants 65.5 2.44e-12   NR KAI3845845.1 215227 g2011 i0 74.4 1.58282208588957 43 11 79.1 0 34 162 1 43 KAI3845845.1 hypothetical protein MKX03_033294 [Papaver bracteatum] diamond 258 65.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Ranunculales Papaveraceae Papaver Papaver bracteatum
32445433 32445433 PRJNA242641_S_NODE_1599_length_183_cov_1.636364_g1571_i0 PRJNA242641 1599 183 1.636364 2.99454612 Striga hermonthica 68872 Plants Plants 54.7 2.65e-7   NR CAA0812701.1 68872 g1571 i0 59.1 2.65573770491803 44 18 72.1 0 133 2 109 152 CAA0812701.1 Late Embryogenesis Abundant 4-5 [Striga hermonthica] diamond 486 54.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Orobanchaceae Striga Striga hermonthica
32540356 32540356 PRJNA242641_S_NODE_1979_length_166_cov_1.678832_g1951_i0 PRJNA242641 1979 166 1.678832 2.78686112 Nelumbo nucifera 4432 Plants Plants 94.7 1.24e-22   NR XP_019053519.1 4432 g1951 i0 77.8 4.87951807228916 54 12 97.6 0 3 164 36 89 XP_019053519.1 PREDICTED: pre-rRNA-processing protein TSR2 homolog isoform X1 [Nelumbo nucifera] diamond 810 94.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Proteales Nelumbonaceae Nelumbo Nelumbo nucifera
32666123 32666123 PRJNA242641_S_NODE_1820_length_172_cov_3.034965_g1792_i0 PRJNA242641 1820 172 3.034965 5.2201398 Tetracentron sinense 13715 Plants Plants 49.3 6.46e-5   NR KAF8408881.1 13715 g1792 i0 50 0.802325581395349 46 23 80.2 0 171 34 7 52 KAF8408881.1 hypothetical protein HHK36_004950 [Tetracentron sinense] diamond 138 49.3 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Trochodendrales Trochodendraceae Tetracentron Tetracentron sinense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;