contig_metadata
5 rows where analysis = "diamond", bioproject = "PRJNA235310" and tax_phylum = "Echinodermata"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18219022 | 18219022 | PRJNA235310_P_NODE_2875_length_225_cov_1.107955_g2849_i0 | PRJNA235310 | 2875 | 225 | 1.107955 | 2.49289875 | Strongylocentrotus purpuratus | 7668 | Echinodermata | other_Eukaryota | 124 | 1.64e-31 | NR | XP_030856194.1 | 7668 | g2849 | i0 | 78.1 | 3.89333333333333 | 73 | 16 | 97.3 | 0 | 223 | 5 | 396 | 468 | XP_030856194.1 dihydrolipoyl dehydrogenase, mitochondrial [Strongylocentrotus purpuratus] | diamond | 876 | 124 | 1 | Eukaryota | Opisthokonta | Metazoa | Echinodermata | Echinoidea | Camarodonta | Strongylocentrotidae | Strongylocentrotus | Strongylocentrotus purpuratus | |
| 29347725 | 29347725 | PRJNA235310_P_NODE_1949_length_283_cov_1.722222_g1923_i0 | PRJNA235310 | 1949 | 283 | 1.722222 | 4.87388826 | Lytechinus variegatus | 7654 | Echinodermata | other_Eukaryota | 68.2 | 7.22e-11 | NR | XP_041452508.1 | 7654 | g1923 | i0 | 47.6 | 5.53356890459364 | 63 | 33 | 66.8 | 0 | 88 | 276 | 1937 | 1999 | XP_041452508.1 SH3 and multiple ankyrin repeat domains protein 3-like isoform X2 [Lytechinus variegatus] | diamond | 1566 | 68.2 | 1 | Eukaryota | Opisthokonta | Metazoa | Echinodermata | Echinoidea | Temnopleuroida | Toxopneustidae | Lytechinus | Lytechinus variegatus | |
| 30976566 | 30976566 | PRJNA235310_P_NODE_4294_length_181_cov_1.159091_g4268_i0 | PRJNA235310 | 4294 | 181 | 1.159091 | 2.09795471 | Eukaryota | 2759 | unresolved_Eukaryota | other_Eukaryota | 44.3 | 0.00459 | NR | KAJ8048217.1 | 206669 | g4268 | i0 | 36.2 | 4.4585635359116 | 58 | 36 | 94.5 | 1 | 9 | 179 | 450 | 507 | KAJ8048217.1 Carboxypeptidase N subunit 2 [Holothuria leucospilota] | diamond | 807 | 44.3 | 1 | Eukaryota | Opisthokonta | Metazoa | Echinodermata | Holothuroidea | Aspidochirotida | Holothuriidae | Holothuria | Holothuria leucospilota | |
| 31021897 | 31021897 | PRJNA235310_P_NODE_3795_length_194_cov_1.075862_g3769_i0 | PRJNA235310 | 3795 | 194 | 1.075862 | 2.08717228 | Asterias rubens | 7604 | Echinodermata | other_Eukaryota | 48.1 | 2.44e-4 | NR | XP_033640528.1 | 7604 | g3769 | i0 | 48.1 | 1.67010309278351 | 54 | 27 | 82 | 1 | 36 | 194 | 649 | 702 | XP_033640528.1 gamma-aminobutyric acid type B receptor subunit 1-like isoform X4 [Asterias rubens] | diamond | 324 | 48.1 | 1 | Eukaryota | Opisthokonta | Metazoa | Echinodermata | Asteroidea | Forcipulatida | Asteriidae | Asterias | Asterias rubens | |
| 32634421 | 32634421 | PRJNA235310_P_NODE_6380_length_162_cov_0.920354_g6354_i0 | PRJNA235310 | 6380 | 162 | 0.920354 | 1.49097348 | Lytechinus variegatus | 7654 | Echinodermata | other_Eukaryota | 53.1 | 8.54e-7 | NR | XP_041470526.1 | 7654 | g6354 | i0 | 58.1 | 0.796296296296296 | 43 | 16 | 79.6 | 1 | 133 | 5 | 107 | 147 | XP_041470526.1 AAC-rich mRNA clone AAC4 protein-like [Lytechinus variegatus] | diamond | 129 | 53.1 | 1 | Eukaryota | Opisthokonta | Metazoa | Echinodermata | Echinoidea | Temnopleuroida | Toxopneustidae | Lytechinus | Lytechinus variegatus |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;