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contig_metadata

22 rows where analysis = "diamond", bioproject = "PRJNA235310" and tax_clade = "FCB group"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • FCB group · 22 ✖

bioproject 1

  • PRJNA235310 · 22 ✖

analysis 1

  • diamond · 22 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1642198 1642198 PRJNA235310_P_NODE_6382_length_162_cov_0.920354_g6356_i0 PRJNA235310 6382 162 0.920354 1.49097348 Ferruginibacter sp. 1940288 Bacteria Bacteria 103 1.28e-24   NR MEO5968007.1 1940288 g6356 i0 94.4 1 54 3 100 0 1 162 99 152 MEO5968007.1 Na+/H+ antiporter NhaA [Ferruginibacter sp.] diamond 162 103 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Ferruginibacter Ferruginibacter sp.
6745045 6745045 PRJNA235310_P_NODE_4326_length_180_cov_1.190840_g4300_i0 PRJNA235310 4326 180 1.19084 2.143512 FCB group 1783270 Bacteria Bacteria 108 3.8800000000000006e-27   NR MEQ8535529.1 2038411 g4300 i0 83.1 2.93333333333333 59 10 98.3 0 178 2 108 166 MEQ8535529.1 type I glyceraldehyde-3-phosphate dehydrogenase [Imperialibacter sp.] diamond 528 109 0.990825688073395 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Flammeovirgaceae Imperialibacter Imperialibacter sp.
26838840 26838840 PRJNA235310_P_NODE_2841_length_227_cov_0.910112_g2815_i0 PRJNA235310 2841 227 0.910112 2.06595424 Pseudomonadati 3379134 Bacteria Bacteria 109 1.92e-26   NR MBS1518142.1 1898104 g2815 i0 68.9 17.7092511013216 74 23 97.8 0 5 226 241 314 MBS1518142.1 tryptophan 2,3-dioxygenase [Bacteroidota bacterium] diamond 4020 110 0.990909090909091 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium
27073963 27073963 PRJNA235310_P_NODE_5262_length_167_cov_0.881356_g5236_i0 PRJNA235310 5262 167 0.881356 1.47186452 Pedobacter sp. 1411316 Bacteria Bacteria 47 4.06e-4   NR RZK77798.1 1411316 g5236 i0 46 0.898203592814371 50 26 89.8 1 163 14 234 282 RZK77798.1 MAG: hypothetical protein EOO85_07910, partial [Pedobacter sp.] diamond 150 47 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Pedobacter Pedobacter sp.
27629036 27629036 PRJNA235310_P_NODE_4464_length_176_cov_1.622047_g4438_i0 PRJNA235310 4464 176 1.622047 2.85480272 Terrimonas 296051 Bacteria Bacteria 60.8 6.21e-9   NR MEM7104478.1 1898104 g4438 i0 71.8 1.43181818181818 39 11 66.5 0 10 126 114 152 MEM7104478.1 Ig-like domain-containing protein [Bacteroidota bacterium] diamond 252 60.8 1 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium
27832053 27832053 PRJNA235310_P_NODE_5284_length_167_cov_0.881356_g5258_i0 PRJNA235310 5284 167 0.881356 1.47186452 Flavobacterium beibuense F44-8 1406840 Bacteria Bacteria 68.6 7.95e-13   NR KGO81188.1 1406840 g5258 i0 55.8 1.90419161676647 52 23 93.4 0 9 164 4 55 KGO81188.1 hypothetical protein Q763_08895 [Flavobacterium beibuense F44-8] diamond 318 68.6 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium beibuense
27895140 27895140 PRJNA235310_P_NODE_5_length_2296_cov_2.916333_g4_i0 PRJNA235310 5 2296 2.916333 66.95900568 Bacteroidota bacterium 1898104 Bacteria Bacteria 228 3.21e-58   NR MEM7104478.1 1898104 g4 i0 42.1 0.415505226480836 318 153 39.6 8 3 911 29 330 MEM7104478.1 Ig-like domain-containing protein [Bacteroidota bacterium] diamond 954 228 1 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium
28116170 28116170 PRJNA235310_P_NODE_425_length_561_cov_2.462891_g401_i0 PRJNA235310 425 561 2.462891 13.81681851 Bacteroidota bacterium 1898104 Bacteria Bacteria 175 4.5e-50   NR MFO0468276.1 1898104 g401 i0 54.2 0.818181818181818 153 67 80.2 1 536 87 196 348 MFO0468276.1 fatty acid desaturase [Bacteroidota bacterium] diamond 459 175 1 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium
28418413 28418413 PRJNA235310_P_NODE_866_length_426_cov_1.864721_g840_i0 PRJNA235310 866 426 1.864721 7.94371146 Bacteria 2 Bacteria Bacteria 68.6 2.32e-10   NR MDR3273682.1 1871037 g840 i0 53.6 1.1830985915493 56 26 39.4 0 252 419 4 59 MDR3273682.1 4-hydroxybutyrate CoA-transferase [Flavobacteriaceae bacterium] diamond 504 68.9 0.995645863570392 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae   Flavobacteriaceae bacterium
29189947 29189947 PRJNA235310_P_NODE_5929_length_164_cov_0.904348_g5903_i0 PRJNA235310 5929 164 0.904348 1.48313072 Siphonobacter sp. BAB-54 1869184 Bacteria Bacteria 74.3 9.24e-14   NR WP_102200481.1 1864825 g5903 i0 75 1.6280487804878 44 11 80.5 0 8 139 904 947 WP_102200481.1 TonB-dependent receptor [Siphonobacter sp. BAB-5405] diamond 267 74.3 1 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Cytophagaceae Siphonobacter Siphonobacter sp. BAB-5405
29207713 29207713 PRJNA235310_P_NODE_5289_length_167_cov_0.881356_g5263_i0 PRJNA235310 5289 167 0.881356 1.47186452 Bacteria 2 Bacteria Bacteria 79 4.98e-17   NR MBA2611136.1 1898104 g5263 i0 67.3 14.8203592814371 55 18 98.8 0 2 166 14 68 MBA2611136.1 MaoC family dehydratase [Bacteroidota bacterium] diamond 2475 79.7 0.991217063989962 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium
29347733 29347733 PRJNA235310_P_NODE_6029_length_164_cov_0.904348_g6003_i0 PRJNA235310 6029 164 0.904348 1.48313072 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 76.3 1.93e-14   NR MBC8416206.1 2030808 g6003 i0 61.1 1.97560975609756 54 21 98.8 0 162 1 460 513 MBC8416206.1 NAD-dependent malic enzyme [Candidatus Cloacimonadota bacterium] diamond 324 76.3 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
30154686 30154686 PRJNA235310_P_NODE_3872_length_192_cov_1.090909_g3846_i0 PRJNA235310 3872 192 1.090909 2.09454528 Bacteria 2 Bacteria Bacteria 44.3 0.00537   NR MEX2602740.1 1974203 g3846 i0 35.8 3.625 53 34 82.8 0 167 9 415 467 MEX2602740.1 YCF48-related protein [Gracilimonas sp.] diamond 696 44.3 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Gracilimonas Gracilimonas sp.
30610992 30610992 PRJNA235310_P_NODE_533_length_521_cov_1.584746_g509_i0 PRJNA235310 533 521 1.584746 8.25652666 Bacteroidales bacterium 2030927 Bacteria Bacteria 50.1 0.00145   NR MCD4744995.1 2030927 g509 i0 31.4 1.08253358925144 188 94 97.9 8 514 5 288 458 MCD4744995.1 hypothetical protein [Bacteroidales bacterium] diamond 564 50.1 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales     Bacteroidales bacterium
31053744 31053744 PRJNA235310_P_NODE_4215_length_183_cov_1.097015_g4189_i0 PRJNA235310 4215 183 1.097015 2.00753745 Ignavibacteria bacterium 2053306 Bacteria Bacteria 76.6 1.72e-15   NR MCX7878859.1 2053306 g4189 i0 62.9 7.16393442622951 62 21 98.4 1 4 183 69 130 MCX7878859.1 NAD(P)H-dependent oxidoreductase [Ignavibacteria bacterium] diamond 1311 76.6 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
31210953 31210953 PRJNA235310_P_NODE_3035_length_218_cov_1.230769_g3009_i0 PRJNA235310 3035 218 1.230769 2.68307642 Mesoflavibacter sp. CH_XMU14 1930902 Bacteria Bacteria 109 2.5e-28   NR WP_336065623.1 3107766 g3009 i0 70.4 0.977064220183486 71 21 97.7 0 4 216 55 125 WP_336065623.1 glycoside hydrolase family 19 protein [Mesoflavibacter sp. CH_XMU1404-2] diamond 213 109 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Mesoflavibacter Mesoflavibacter sp. CH_XMU1404-2
31482533 31482533 PRJNA235310_P_NODE_2016_length_277_cov_1.824561_g1990_i0 PRJNA235310 2016 277 1.824561 5.05403397 Bacteroidota 976 Bacteria Bacteria 50.4 2.7e-5   NR WP_090338004.1 408657 g1990 i0 87 7.70036101083033 23 3 24.9 0 152 220 33 55 WP_090338004.1 DUF1348 family protein [Dyadobacter koreensis] diamond 2133 50.8 0.992125984251969 Bacteria FCB group Pseudomonadati Bacteroidota Cytophagia Cytophagales Spirosomataceae Dyadobacter Dyadobacter koreensis
31577237 31577237 PRJNA235310_P_NODE_56_length_1088_cov_4.425409_g44_i0 PRJNA235310 56 1088 4.425409 48.14844992 Winogradskyella 286104 Bacteria Bacteria 67.8 4.15e-8   NR WP_087491296.1 754417 g44 i0 33.7 1.09742647058824 199 97 53.2 8 665 87 1653 1822 WP_087491296.1 Ig-like domain-containing protein, partial [Winogradskyella sp. PC-19] diamond 1194 67.8 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Winogradskyella Winogradskyella sp. PC-19
31717488 31717488 PRJNA235310_P_NODE_2657_length_234_cov_1.686486_g2631_i0 PRJNA235310 2657 234 1.686486 3.94637724 Bacteroidales bacterium 2030927 Bacteria Bacteria 43.5 0.0173   NR HEX3007099.1 2030927 g2631 i0 31.3 0.82051282051282 64 44 82.1 0 206 15 262 325 HEX3007099.1 right-handed parallel beta-helix repeat-containing protein [Bacteroidales bacterium] diamond 192 43.5 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales     Bacteroidales bacterium
31766832 31766832 PRJNA235310_P_NODE_17_length_1662_cov_8.960942_g11_i0 PRJNA235310 17 1662 8.960942 148.93085604 Candidatus Opimibacter 2981997 Bacteria Bacteria 118 1.2399999999999999e-23   NR HQW25704.1 2202734 g11 i0 40.5 1.61913357400722 190 97 32.9 7 672 127 833 1014 HQW25704.1 HYR domain-containing protein [Saprospiraceae bacterium] diamond 2691 118 1 Bacteria FCB group Pseudomonadati Bacteroidota Saprospiria Saprospirales Saprospiraceae   Saprospiraceae bacterium
31843900 31843900 PRJNA235310_P_NODE_3657_length_197_cov_1.405405_g3631_i0 PRJNA235310 3657 197 1.405405 2.76864785 uncultured Flavobacterium sp. 165435 Bacteria Bacteria 43.5 0.00579   NR WP_288981181.1 165435 g3631 i0 45 0.609137055837564 40 22 60.9 0 120 1 55 94 WP_288981181.1 hypothetical protein [uncultured Flavobacterium sp.] diamond 120 43.5 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium uncultured Flavobacterium sp.
32033897 32033897 PRJNA235310_P_NODE_4338_length_179_cov_2.307692_g4312_i0 PRJNA235310 4338 179 2.307692 4.13076868 Saprospiraceae bacterium 2202734 Bacteria Bacteria 57.8 7.94e-8   NR MFN8303924.1 2202734 g4312 i0 59.6 1.67597765363128 47 19 78.8 0 155 15 692 738 MFN8303924.1 T9SS type A sorting domain-containing protein [Saprospiraceae bacterium] diamond 300 57.8 1 Bacteria FCB group Pseudomonadati Bacteroidota Saprospiria Saprospirales Saprospiraceae   Saprospiraceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;