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contig_metadata

32 rows where analysis = "diamond", bioproject = "PRJNA229468" and tax_phylum = "Streptophyta"

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tax_superkingdom 1

tax_phylum 1

  • Streptophyta · 32 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA229468 · 32 ✖

analysis 1

  • diamond · 32 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
367289 367289 PRJNA229468_S_NODE_561_length_213_cov_2.024390_g548_i0 PRJNA229468 561 213 2.02439 4.3119507 Poaceae 4479 Plants Plants 132 1.5e-34   NR KAI4987833.1 4513 g548 i0 90 40.4225352112676 70 7 98.6 0 212 3 74 143 KAI4987833.1 hypothetical protein ZWY2020_028591 [Hordeum vulgare] diamond 8610 132 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
4884543 4884543 PRJNA229468_S_NODE_304_length_284_cov_1.412766_g291_i0 PRJNA229468 304 284 1.412766 4.01225544 Eukaryota 2759 Plants Plants 155 8.8e-46   NR KAG0606884.1 3225 g291 i0 75.3 106.119718309859 93 23 98.2 0 2 280 89 181 KAG0606884.1 hypothetical protein M758_9G176000 [Ceratodon purpureus] diamond 30138 156 0.993589743589744 Eukaryota Embryophyta Viridiplantae Streptophyta Bryopsida Pseudoditrichales Ditrichaceae Ceratodon Ceratodon purpureus
8020691 8020691 PRJNA229468_S_NODE_607_length_208_cov_1.213836_g594_i0 PRJNA229468 607 208 1.213836 2.52477888 Magnoliopsida 3398 Plants Plants 104 1.39e-26   NR RAL54839.1 267555 g594 i0 76.5 95.1346153846154 68 16 98.1 0 206 3 38 105 RAL54839.1 hypothetical protein DM860_013535 [Cuscuta australis] diamond 19788 104 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Convolvulaceae Cuscuta Cuscuta australis
9295362 9295362 PRJNA229468_S_NODE_728_length_192_cov_1.426573_g715_i0 PRJNA229468 728 192 1.426573 2.73902016 Eukaryota 2759 Plants Plants 105 1.62e-26   NR KAG0606884.1 3225 g715 i0 73.4 43 64 17 100 0 1 192 111 174 KAG0606884.1 hypothetical protein M758_9G176000 [Ceratodon purpureus] diamond 8256 105 1 Eukaryota Embryophyta Viridiplantae Streptophyta Bryopsida Pseudoditrichales Ditrichaceae Ceratodon Ceratodon purpureus
10571342 10571342 PRJNA229468_S_NODE_809_length_184_cov_2.259259_g796_i0 PRJNA229468 809 184 2.259259 4.15703656 Rehmannia glutinosa 99300 Plants Plants 110 4.1e-28   NR KAK6145679.1 99300 g796 i0 81.4 1.92391304347826 59 11 96.2 0 179 3 6 64 KAK6145679.1 hypothetical protein DH2020_022499 [Rehmannia glutinosa] diamond 354 110 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Orobanchaceae Rehmannia Rehmannia glutinosa
11845857 11845857 PRJNA229468_S_NODE_990_length_171_cov_1.254098_g977_i0 PRJNA229468 990 171 1.254098 2.14450758 Eukaryota 2759 Plants Plants 111 4.5e-29   NR XP_027353241.1 3816 g977 i0 87.5 52.9473684210526 56 7 98.2 0 3 170 80 135 XP_027353241.1 peptidyl-prolyl cis-trans isomerase CYP19-3-like isoform X1 [Abrus precatorius] diamond 9054 112 0.991071428571429 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Abrus Abrus precatorius
16944568 16944568 PRJNA229468_S_NODE_214_length_330_cov_1.633452_g201_i0 PRJNA229468 214 330 1.633452 5.3903916 Streptophyta 35493 Plants Plants 196 3.03e-59   NR XP_026411728.1 3469 g201 i0 89.9 171.418181818182 109 11 99.1 0 2 328 186 294 XP_026411728.1 ADP,ATP carrier protein-like [Papaver somniferum] diamond 56568 196 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Ranunculales Papaveraceae Papaver Papaver somniferum
22733346 22733346 PRJNA229468_S_NODE_418_length_243_cov_1.268041_g405_i0 PRJNA229468 418 243 1.268041 3.08133963 Juncus effusus 13579 Plants Plants 117 7.06e-30   NR KAJ3679406.1 13579 g405 i0 78.5 8.54320987654321 79 17 97.5 0 239 3 121 199 KAJ3679406.1 hypothetical protein LUZ60_017417 [Juncus effusus] diamond 2076 117 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Juncaceae Juncus Juncus effusus
25282657 25282657 PRJNA229468_S_NODE_780_length_187_cov_1.847826_g767_i0 PRJNA229468 780 187 1.847826 3.45543462 Eukaryota 2759 Plants Plants 77 9.29e-15   NR CAL9044716.1 213591 g767 i0 66.7 13.6524064171123 54 18 86.6 0 181 20 268 321 CAL9044716.1 unnamed protein product [Musa banksii] diamond 2553 77.4 0.994832041343669 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Zingiberales Musaceae Musa Musa banksii
27010587 27010587 PRJNA229468_S_NODE_1062_length_167_cov_0.864407_g1049_i0 PRJNA229468 1062 167 0.864407 1.44355969 Macadamia integrifolia 60698 Plants Plants 94.7 2.1399999999999994e-23   NR XP_042507292.1 60698 g1049 i0 81.5 26.1736526946108 54 10 97 0 6 167 41 94 XP_042507292.1 40S ribosomal protein S26-like [Macadamia integrifolia] diamond 4371 94.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Proteales Proteaceae Macadamia Macadamia integrifolia
27534131 27534131 PRJNA229468_S_NODE_603_length_209_cov_0.956250_g590_i0 PRJNA229468 603 209 0.95625 1.9985625 root 1 Root_unresolved Root_unresolved 51.6 1.21e-5   NR KAK7274507.1 3830 g590 i0 44.1 5.22488038277512 59 33 84.7 0 200 24 11 69 KAK7274507.1 hypothetical protein RIF29_15599 [Crotalaria pallida] diamond 1092 51.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Crotalaria Crotalaria pallida
27912796 27912796 PRJNA229468_S_NODE_285_length_292_cov_1.674897_g272_i0 PRJNA229468 285 292 1.674897 4.89069924 Eukaryota 2759 Plants Plants 96.7 2.14e-22   NR GAQ86255.1 105231 g272 i0 56.4 18.4006849315068 101 40 99.7 2 292 2 71 171 GAQ86255.1 40S ribosomal protein S8 [Klebsormidium nitens] diamond 5373 97.4 0.992813141683778 Eukaryota   Viridiplantae Streptophyta Klebsormidiophyceae Klebsormidiales Klebsormidiaceae Klebsormidium Klebsormidium nitens
28021700 28021700 PRJNA229468_S_NODE_1205_length_162_cov_2.256637_g1192_i0 PRJNA229468 1205 162 2.256637 3.65575194 Lotus japonicus 34305 Plants Plants 99.4 1.25e-24   NR AFK43985.1 34305 g1192 i0 84.9 0.981481481481482 53 8 98.1 0 2 160 41 93 AFK43985.1 unknown [Lotus japonicus] diamond 159 99.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Lotus Lotus japonicus
28116161 28116161 PRJNA229468_S_NODE_1285_length_157_cov_2.305556_g1272_i0 PRJNA229468 1285 157 2.305556 3.61972292 Panicum virgatum 38727 Plants Plants 62.8 9.01e-10   NR XP_039798154.1 38727 g1272 i0 61.4 7.56687898089172 44 17 84.1 0 153 22 278 321 XP_039798154.1 cytochrome P450 714C3-like [Panicum virgatum] diamond 1188 62.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Panicum Panicum virgatum
28354970 28354970 PRJNA229468_S_NODE_606_length_208_cov_1.283019_g593_i0 PRJNA229468 606 208 1.283019 2.66867952 Eukaryota 2759 Plants Plants 43.5 0.013   NR KAH9307568.1 29808 g593 i0 44.2 1.80288461538462 43 24 62 0 207 79 138 180 KAH9307568.1 hypothetical protein KI387_035479 [Taxus chinensis] diamond 375 43.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Cupressales Taxaceae Taxus Taxus chinensis
28495305 28495305 PRJNA229468_S_NODE_1067_length_167_cov_0.864407_g1054_i0 PRJNA229468 1067 167 0.864407 1.44355969 Zizania palustris 103762 Plants Plants 47 4.24e-4   NR KAG8098239.1 103762 g1054 i0 46.2 0.934131736526946 52 26 93.4 1 156 1 447 496 KAG8098239.1 hypothetical protein GUJ93_ZPchr0013g36173 [Zizania palustris] diamond 156 47 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Zizania Zizania palustris
28607643 28607643 PRJNA229468_S_NODE_847_length_181_cov_1.931818_g834_i0 PRJNA229468 847 181 1.931818 3.49659058 Eukaryota 2759 Plants Plants 51.2 6.81e-6   NR PWA46368.1 35608 g834 i0 50 9.53038674033149 64 26 96.1 3 177 4 9 72 PWA46368.1 translationally controlled tumor protein 2 [Artemisia annua] diamond 1725 51.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Artemisia Artemisia annua
28621578 28621578 PRJNA229468_S_NODE_127_length_437_cov_1.286082_g114_i0 PRJNA229468 127 437 1.286082 5.62017834 Lotus japonicus 34305 Plants Plants 182 5.24e-54   NR AFK37198.1 34305 g114 i0 67.4 4.8466819221968 141 45 96.8 1 14 436 102 241 AFK37198.1 unknown [Lotus japonicus] diamond 2118 182 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Lotus Lotus japonicus
28734007 28734007 PRJNA229468_S_NODE_247_length_316_cov_1.779026_g234_i0 PRJNA229468 247 316 1.779026 5.62172216 Eukaryota 2759 Plants Plants 148 7.95e-43   NR GBG72131.1 69332 g234 i0 73 50.3544303797468 100 27 94.9 0 3 302 81 180 GBG72131.1 hypothetical protein CBR_g11064 [Chara braunii] diamond 15912 149 0.993288590604027 Eukaryota   Viridiplantae Streptophyta Charophyceae Charales Characeae Chara Chara braunii
29095185 29095185 PRJNA229468_S_NODE_1068_length_167_cov_0.864407_g1055_i0 PRJNA229468 1068 167 0.864407 1.44355969 Klebsormidium nitens 105231 Plants Plants 91.3 1.66e-20   NR GAQ83285.1 105231 g1055 i0 78.2 9.88023952095808 55 12 98.8 0 166 2 188 242 GAQ83285.1 40S ribosomal protein S2 [Klebsormidium nitens] diamond 1650 91.3 1 Eukaryota   Viridiplantae Streptophyta Klebsormidiophyceae Klebsormidiales Klebsormidiaceae Klebsormidium Klebsormidium nitens
29270517 29270517 PRJNA229468_S_NODE_249_length_316_cov_1.337079_g236_i0 PRJNA229468 249 316 1.337079 4.22516964 Sapindales 41937 Plants Plants 135 2.27e-38   NR KDO58084.1 2711 g236 i0 60.6 7.51898734177215 99 39 94 0 299 3 9 107 KDO58084.1 hypothetical protein CISIN_1g027063mg [Citrus sinensis] diamond 2376 135 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Sapindales Rutaceae Citrus Citrus sinensis
29473672 29473672 PRJNA229468_S_NODE_130_length_422_cov_1.680965_g117_i0 PRJNA229468 130 422 1.680965 7.0936723 Hibiscus syriacus 106335 Plants Plants 130 4.49e-35   NR XP_039028146.1 106335 g117 i0 50 0.838862559241706 118 58 83.2 1 72 422 12 129 XP_039028146.1 tyrosine-protein phosphatase DSP3-like [Hibiscus syriacus] diamond 354 130 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malvales Malvaceae Hibiscus Hibiscus syriacus
29505402 29505402 PRJNA229468_S_NODE_690_length_197_cov_1.709459_g677_i0 PRJNA229468 690 197 1.709459 3.36763423 Rhynchospora tenuis 198213 Plants Plants 60.5 1.04e-8   NR KAJ3696647.1 198213 g677 i0 54.4 4.34010152284264 57 26 86.8 0 192 22 45 101 KAJ3696647.1 hypothetical protein LUZ61_000352 [Rhynchospora tenuis] diamond 855 60.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Cyperaceae Rhynchospora Rhynchospora tenuis
30944948 30944948 PRJNA229468_S_NODE_634_length_204_cov_0.987097_g621_i0 PRJNA229468 634 204 0.987097 2.01367788 Eukaryota 2759 Plants Plants 95.5 5.9400000000000005e-21   NR P0C8M8.1 4577 g621 i0 58.8 5 68 28 100 0 204 1 247 314 P0C8M8.1 RecName: Full=Probable serine/threonine-protein kinase CCRP1; AltName: Full=Cell-cycle related Protein 1 [Zea mays] diamond 1020 95.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Zea Zea mays
30958749 30958749 PRJNA229468_S_NODE_1254_length_161_cov_0.910714_g1241_i0 PRJNA229468 1254 161 0.910714 1.46624954 Nicotiana tomentosiformis 4098 Plants Plants 65.9 8.3e-11   NR XP_070043151.1 4098 g1241 i0 67.9 2.96273291925466 53 17 98.8 0 3 161 196 248 XP_070043151.1 uncharacterized protein [Nicotiana tomentosiformis] diamond 477 65.9 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Nicotiana Nicotiana tomentosiformis
31147816 31147816 PRJNA229468_S_NODE_455_length_232_cov_1.672131_g442_i0 PRJNA229468 455 232 1.672131 3.87934392 Apostasia shenzhenica 1088818 Plants Plants 53.5 3.44e-6   NR PKA65604.1 1088818 g442 i0 46.2 0.84051724137931 65 33 81.5 1 228 40 70 134 PKA65604.1 putative glutathione S-transferase [Apostasia shenzhenica] diamond 195 53.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asparagales Orchidaceae Apostasia Apostasia shenzhenica
31179503 31179503 PRJNA229468_S_NODE_795_length_186_cov_1.080292_g782_i0 PRJNA229468 795 186 1.080292 2.00934312 Zea mays 4577 Plants Plants 80.9 1.51e-17   NR ACG44159.1 4577 g782 i0 68.9 0.983870967741935 61 18 98.4 1 185 3 8 67 ACG44159.1 40S ribosomal protein S15 [Zea mays] diamond 183 80.9 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Zea Zea mays
31274649 31274649 PRJNA229468_S_NODE_555_length_214_cov_0.927273_g542_i0 PRJNA229468 555 214 0.927273 1.98436422 Drosera rotundifolia 173423 Plants Plants 79.3 1.69e-15   NR GAB2213731.1 173423 g542 i0 66 3 53 18 74.3 0 159 1 2 54 GAB2213731.1 hypothetical protein Drorol1_Dr00018044 [Drosera rotundifolia] diamond 642 79.3 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Caryophyllales Droseraceae Drosera Drosera rotundifolia
31337856 31337856 PRJNA229468_S_NODE_576_length_212_cov_1.251534_g563_i0 PRJNA229468 576 212 1.251534 2.65325208 Juncus effusus 13579 Plants Plants 99.4 2.08e-22   NR KAJ3695967.1 13579 g563 i0 59.7 6.29716981132075 67 27 94.8 0 211 11 276 342 KAJ3695967.1 hypothetical protein LUZ60_001344 [Juncus effusus] diamond 1335 99.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Juncaceae Juncus Juncus effusus
31749000 31749000 PRJNA229468_S_NODE_637_length_203_cov_2.266234_g624_i0 PRJNA229468 637 203 2.266234 4.60045502 Ceratopteris richardii 49495 Plants Plants 82.8 2.1e-18   NR KAH7446979.1 49495 g624 i0 58.5 3.78325123152709 65 27 96.1 0 196 2 6 70 KAH7446979.1 hypothetical protein KP509_01G085000 [Ceratopteris richardii] diamond 768 82.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Polypodiopsida Polypodiales Pteridaceae Ceratopteris Ceratopteris richardii
32097107 32097107 PRJNA229468_S_NODE_678_length_198_cov_2.046980_g665_i0 PRJNA229468 678 198 2.04698 4.0530204 Camellia sinensis 4442 Plants Plants 68.2 6.85e-13   NR CAL5339851.1 4442 g665 i0 59.3 3.27272727272727 54 22 81.8 0 179 18 5 58 CAL5339851.1 unnamed protein product [Camellia sinensis] diamond 648 68.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Ericales Theaceae Camellia Camellia sinensis
32255732 32255732 PRJNA229468_S_NODE_198_length_344_cov_2.000000_g185_i0 PRJNA229468 198 344 2 6.88 Anisodus tanguticus 243964 Plants Plants 102 1.43e-24   NR KAK4336798.1 243964 g185 i0 50 3.75 114 51 99.4 2 3 344 50 157 KAK4336798.1 hypothetical protein RND71_043577 [Anisodus tanguticus] diamond 1290 102 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Anisodus Anisodus tanguticus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;