RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "diamond", bioproject = "PRJNA229468" and tax_phylum = "Candidatus Firestoneibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Firestoneibacteriota · 1 ✖

tax_clade 1

bioproject 1

  • PRJNA229468 · 1 ✖

analysis 1

  • diamond · 1 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32223800 32223800 PRJNA229468_S_NODE_538_length_216_cov_1.029940_g525_i0 PRJNA229468 538 216 1.02994 2.2246704 Candidatus Firestoneibacteriota bacterium 2715505 Bacteria Bacteria 42 0.049   NR MEI7903879.1 2715505 g525 i0 36.4 0.916666666666667 66 36 91.7 2 12 209 544 603 MEI7903879.1 T9SS type A sorting domain-containing protein [Candidatus Firestonebacteria bacterium] diamond 198 42 1 Bacteria Bacteria candidate phyla   Candidatus Firestoneibacteriota         Candidatus Firestoneibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;