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contig_metadata

29 rows where analysis = "diamond", bioproject = "PRJNA229468" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 29 ✖

bioproject 1

  • PRJNA229468 · 29 ✖

analysis 1

  • diamond · 29 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6159315 6159315 PRJNA229468_S_NODE_5_length_1253_cov_6.700997_g4_i0 PRJNA229468 5 1253 6.700997 83.96349241 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 680 1.4699999999999996e-243   NR PRP87501.1 1890364 g4 i0 84.8 8.96169193934557 401 61 96 0 1 1203 32 432 PRP87501.1 elongation factor 1 alpha [Planoprotostelium fungivorum] diamond 11229 680 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
9295360 9295360 PRJNA229468_S_NODE_428_length_239_cov_2.336842_g415_i0 PRJNA229468 428 239 2.336842 5.58505238 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 147 2.5e-41   NR XP_004338972.1 1257118 g415 i0 88.6 14.5983263598326 79 9 99.2 0 237 1 10 88 XP_004338972.1 adenine nucleotide translocator, putative [Acanthamoeba castellanii str. Neff] diamond 3489 147 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
10571336 10571336 PRJNA229468_S_NODE_329_length_274_cov_1.395556_g316_i0 PRJNA229468 329 274 1.395556 3.82382344 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 160 4.69e-49   NR XP_004339588.1 1257118 g316 i0 85.7 8.96715328467153 91 13 99.6 0 273 1 12 102 XP_004339588.1 60S ribosomal protein, putative [Acanthamoeba castellanii str. Neff] diamond 2457 160 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
10571340 10571340 PRJNA229468_S_NODE_729_length_192_cov_1.251748_g716_i0 PRJNA229468 729 192 1.251748 2.40335616 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 103 7.04e-25   NR XP_004356622.1 1257118 g716 i0 76.6 1 64 15 100 0 192 1 226 289 XP_004356622.1 mitochondrial phosphate transporter, putative [Acanthamoeba castellanii str. Neff] diamond 192 103 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
17634187 17634187 PRJNA229468_S_NODE_774_length_188_cov_1.201439_g761_i0 PRJNA229468 774 188 1.201439 2.25870532 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 92 7.58e-20   NR XP_004348463.1 1257118 g761 i0 72.1 3.8936170212766 61 17 97.3 0 5 187 289 349 XP_004348463.1 DEAD box RNA helicase [Acanthamoeba castellanii str. Neff] diamond 732 92 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
19493250 19493250 PRJNA229468_S_NODE_96_length_504_cov_1.114286_g84_i0 PRJNA229468 96 504 1.114286 5.61600144 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 155 3.5799999999999993e-43   NR XP_004341795.1 1257118 g84 i0 63.3 2.01190476190476 169 61 100 1 1 504 38 206 XP_004341795.1 guanine nucleotide-binding protein beta subunit, putative [Acanthamoeba castellanii str. Neff] diamond 1014 155 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
23319338 23319338 PRJNA229468_S_NODE_819_length_184_cov_1.096296_g806_i0 PRJNA229468 819 184 1.096296 2.01718464 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 78.6 3.77e-15   NR KYR02245.1 361077 g806 i0 57.6 0.96195652173913 59 25 96.2 0 6 182 6 64 KYR02245.1 40S ribosomal protein SA [Tieghemostelium lacteum] diamond 177 78.6 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
26648403 26648403 PRJNA229468_S_NODE_761_length_189_cov_1.107143_g748_i0 PRJNA229468 761 189 1.107143 2.09250027 root 1 Root_unresolved Root_unresolved 87 2.18e-18   NR XP_004336164.1 1257118 g748 i0 71 6.88888888888889 62 18 98.4 0 188 3 166 227 XP_004336164.1 alcohol dehydrogenase GroESlike domain containing protein [Acanthamoeba castellanii str. Neff] diamond 1302 87.4 0.995423340961098 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
26884298 26884298 PRJNA229468_S_NODE_361_length_264_cov_3.669767_g348_i0 PRJNA229468 361 264 3.669767 9.68818488 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 58.9 4.5e-9   NR PRP89373.1 1890364 g348 i0 64.4 0.988636363636364 87 29 97.7 2 259 2 3 88 PRP89373.1 hypothetical protein PROFUN_01236 [Planoprotostelium fungivorum] diamond 261 58.9 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
27786887 27786887 PRJNA229468_S_NODE_1124_length_165_cov_0.879310_g1111_i0 PRJNA229468 1124 165 0.87931 1.4508615 Evosea 2605435 Evosea other_Eukaryota 50.4 1.63e-5   NR XP_020437879.1 670386 g1111 i0 43.4 1.92727272727273 53 30 96.4 0 164 6 12 64 XP_020437879.1 hypothetical protein PPL_01003 [Heterostelium album PN500] diamond 318 50.8 0.992125984251969 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
27863581 27863581 PRJNA229468_S_NODE_1085_length_166_cov_1.299145_g1072_i0 PRJNA229468 1085 166 1.299145 2.1565807 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 84.7 3e-18   NR PRP82908.1 1890364 g1072 i0 74.1 0.975903614457831 54 14 97.6 0 164 3 110 163 PRP82908.1 40S ribosomal protein S6 [Planoprotostelium fungivorum] diamond 162 84.7 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
28021701 28021701 PRJNA229468_S_NODE_445_length_235_cov_1.220430_g432_i0 PRJNA229468 445 235 1.22043 2.8680105 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 75.5 9.64e-14   NR KAH3743581.1 1580589 g432 i0 49.4 0.982978723404255 77 39 98.3 0 3 233 937 1013 KAH3743581.1 alpha-actinin A [Pelomyxa schiedti] diamond 231 75.5 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
28084589 28084589 PRJNA229468_S_NODE_505_length_223_cov_0.879310_g492_i0 PRJNA229468 505 223 0.87931 1.9608613 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 56.6 3.02e-7   NR KAH3756034.1 1580589 g492 i0 37.9 0.887892376681614 66 40 88.8 1 24 221 49 113 KAH3756034.1 3-isopropylmalate dehydratase [Pelomyxa schiedti] diamond 198 56.6 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
28260135 28260135 PRJNA229468_S_NODE_106_length_483_cov_4.246544_g94_i0 PRJNA229468 106 483 4.246544 20.51080752 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 171 1.62e-51   NR 7SOG_A 5755 g94 i0 59.4 5.85093167701863 133 54 82.6 0 5 403 3 135 7SOG_A Chain A, Actophorin [Acanthamoeba castellanii] diamond 2826 172 0.994186046511628 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28905371 28905371 PRJNA229468_S_NODE_188_length_352_cov_0.963696_g175_i0 PRJNA229468 188 352 0.963696 3.39220992 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 106 1.15e-25   NR KAH3756076.1 1580589 g175 i0 48.6 0.946022727272727 111 56 93.8 1 22 351 60 170 KAH3756076.1 glycoside hydrolase family 25 protein [Pelomyxa schiedti] diamond 333 106 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
29063598 29063598 PRJNA229468_S_NODE_348_length_267_cov_2.211009_g335_i0 PRJNA229468 348 267 2.211009 5.90339403 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 155 4.52e-47   NR XP_004352812.1 1257118 g335 i0 85.2 2.97752808988764 88 13 98.9 0 1 264 2 89 XP_004352812.1 ribosomal L37ae protein family [Acanthamoeba castellanii str. Neff] diamond 795 155 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29189937 29189937 PRJNA229468_S_NODE_549_length_215_cov_0.921687_g536_i0 PRJNA229468 549 215 0.921687 1.98162705 Lesquereusia modesta 1260108 Tubulinea other_Eukaryota 119 5.1e-31   NR AFX73094.1 1260108 g536 i0 81.7 1.98139534883721 71 13 99.1 0 214 2 12 82 AFX73094.1 elongation factor 2 alpha, partial [Lesquereusia modesta] diamond 426 119 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Lesquereusiidae Lesquereusia Lesquereusia modesta
29491646 29491646 PRJNA229468_S_NODE_430_length_239_cov_1.342105_g417_i0 PRJNA229468 430 239 1.342105 3.20763095 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 113 1.65e-27   NR XP_003291358.1 5786 g417 i0 57.7 22.2928870292887 78 33 97.9 0 239 6 265 342 XP_003291358.1 actin binding protein [Dictyostelium purpureum] diamond 5328 114 0.991228070175439 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
29852921 29852921 PRJNA229468_S_NODE_391_length_251_cov_1.009901_g378_i0 PRJNA229468 391 251 1.009901 2.53485151 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 72 2.03e-12   NR KYR02947.1 361077 g378 i0 63.8 0.824701195219124 69 24 81.3 1 209 6 735 803 KYR02947.1 I/LWEQ domain-containing protein [Tieghemostelium lacteum] diamond 207 72 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
29947671 29947671 PRJNA229468_S_NODE_151_length_394_cov_1.342029_g138_i0 PRJNA229468 151 394 1.342029 5.28759426 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 135 4.9000000000000005e-34   NR XP_004338648.1 1257118 g138 i0 53.4 2.70304568527919 116 53 88.3 1 387 40 226 340 XP_004338648.1 ABC transporter, ATPbinding domain containing protein [Acanthamoeba castellanii str. Neff] diamond 1065 135 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29979211 29979211 PRJNA229468_S_NODE_731_length_192_cov_1.069930_g718_i0 PRJNA229468 731 192 1.06993 2.0542656 Dictyostelium purpureum 5786 Evosea other_Eukaryota 67 5.31e-11   NR XP_003284159.1 5786 g718 i0 55.9 9.625 59 26 92.2 0 192 16 16 74 XP_003284159.1 uncharacterized protein DICPUDRAFT_27275, partial [Dictyostelium purpureum] diamond 1848 67 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
30091552 30091552 PRJNA229468_S_NODE_352_length_266_cov_1.410138_g339_i0 PRJNA229468 352 266 1.410138 3.75096708 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 119 6.969999999999999e-32   NR XP_004358287.1 1257118 g339 i0 65.9 3.86842105263158 88 29 99.2 1 2 265 6 92 XP_004358287.1 eukaryotic ribosomal protein L18, putative [Acanthamoeba castellanii str. Neff] diamond 1029 119 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30471075 30471075 PRJNA229468_S_NODE_353_length_266_cov_1.410138_g340_i0 PRJNA229468 353 266 1.410138 3.75096708 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 57.8 2.45e-7   NR ALV66539.1 5755 g340 i0 50 3.43984962406015 74 31 82.3 3 255 37 368 436 ALV66539.1 arginine methyltransferase 5 [Acanthamoeba castellanii] diamond 915 57.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30642553 30642553 PRJNA229468_S_NODE_533_length_217_cov_1.113095_g520_i0 PRJNA229468 533 217 1.113095 2.41541615 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 58.5 6.94e-8   NR KYQ89057.1 361077 g520 i0 51.4 0.967741935483871 70 34 96.8 0 215 6 655 724 KYQ89057.1 major vault protein [Tieghemostelium lacteum] diamond 210 58.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
30769172 30769172 PRJNA229468_S_NODE_1134_length_165_cov_0.879310_g1121_i0 PRJNA229468 1134 165 0.87931 1.4508615 Cavenderia fasciculata 261658 Evosea other_Eukaryota 97.8 1.54e-23   NR XP_004352159.1 261658 g1121 i0 85.2 1.96363636363636 54 8 98.2 0 162 1 149 202 XP_004352159.1 40S ribosomal protein S3 [Cavenderia fasciculata] diamond 324 97.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
31242982 31242982 PRJNA229468_S_NODE_95_length_505_cov_2.032895_g83_i0 PRJNA229468 95 505 2.032895 10.26611975 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 184 4.649999999999998e-55   NR XP_004340229.1 1257118 g83 i0 62 1.01584158415842 171 56 98 4 495 1 1 168 XP_004340229.1 ribosomal protein L6e, putative [Acanthamoeba castellanii str. Neff] diamond 513 184 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32223799 32223799 PRJNA229468_S_NODE_158_length_383_cov_4.443114_g145_i0 PRJNA229468 158 383 4.443114 17.01712662 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 130 2.3e-35   NR PRP86688.1 1890364 g145 i0 56.1 1.93472584856397 123 52 94.8 2 3 365 84 206 PRP86688.1 hypothetical protein PROFUN_05167 [Planoprotostelium fungivorum] diamond 741 130 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
32540338 32540338 PRJNA229468_S_NODE_1019_length_169_cov_1.458333_g1006_i0 PRJNA229468 1019 169 1.458333 2.46458277 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 65.9 9.64e-11   NR PRP88631.1 1890364 g1006 i0 78.4 0.656804733727811 37 8 65.7 0 114 4 377 413 PRP88631.1 hypothetical protein PROFUN_03042 [Planoprotostelium fungivorum] diamond 111 65.9 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
32666113 32666113 PRJNA229468_S_NODE_580_length_212_cov_0.938650_g567_i0 PRJNA229468 580 212 0.93865 1.989938 Dictyostelium purpureum 5786 Evosea other_Eukaryota 55.5 8.14e-7   NR XP_003288439.1 5786 g567 i0 41.4 4.13207547169811 70 40 99.1 1 1 210 773 841 XP_003288439.1 uncharacterized protein DICPUDRAFT_47922 [Dictyostelium purpureum] diamond 876 55.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;