RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA217180" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA217180 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29505390 29505390 PRJNA217180_P_NODE_14370_length_163_cov_0.894737_g14270_i0 PRJNA217180 14370 163 0.894737 1.45842131 Saccostrea echinata 191078 Mollusca Mollusca 48.5 1.16e-4   NR XP_061194638.1 191078 g14270 i0 42.3 3.69938650306748 52 26 95.7 1 160 5 47 94 XP_061194638.1 uncharacterized protein LOC133202773 [Saccostrea echinata] diamond 603 48.5 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Ostreida Ostreidae Saccostrea Saccostrea echinata
30313451 30313451 PRJNA217180_P_NODE_13952_length_164_cov_0.886957_g13852_i0 PRJNA217180 13952 164 0.886957 1.45460948 Plakobranchidae 71492 Mollusca Mollusca 110 1.59e-26   NR RUS76774.1 188477 g13852 i0 98.1 5.90853658536585 53 1 97 0 163 5 540 592 RUS76774.1 hypothetical protein EGW08_015451 [Elysia chlorotica] diamond 969 111 0.990990990990991 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Plakobranchidae Elysia Elysia chlorotica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;