RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA217180" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA217180 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27800669 27800669 PRJNA217180_P_NODE_13904_length_164_cov_0.886957_g13804_i0 PRJNA217180 13904 164 0.886957 1.45460948 Melioribacteraceae bacterium 2614255 Bacteria Bacteria 52.8 3.67e-6   NR MFA7287678.1 2614255 g13804 i0 38.9 0.98780487804878 54 33 98.8 0 2 163 50 103 MFA7287678.1 hypothetical protein [Melioribacteraceae bacterium] diamond 162 52.8 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Melioribacteraceae   Melioribacteraceae bacterium
28779179 28779179 PRJNA217180_P_NODE_11907_length_171_cov_0.959016_g11807_i0 PRJNA217180 11907 171 0.959016 1.63991736 Ignavibacteria bacterium 2053306 Bacteria Bacteria 91.3 5.95e-22   NR MBK6773429.1 2053306 g11807 i0 89.6 0.842105263157895 48 5 84.2 0 145 2 4 51 MBK6773429.1 hypothetical protein [Ignavibacteria bacterium] diamond 144 91.3 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
30073837 30073837 PRJNA217180_P_NODE_15132_length_161_cov_2.375000_g15032_i0 PRJNA217180 15132 161 2.375 3.82375 Ignavibacteriaceae bacterium 2651163 Bacteria Bacteria 70.9 1.23e-12   NR MBV6514003.1 2651163 g15032 i0 100 0.652173913043478 35 0 65.2 0 57 161 1 35 MBV6514003.1 hypothetical protein [Ignavibacteriaceae bacterium] diamond 105 70.9 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae   Ignavibacteriaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;