RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA217180" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 3 ✖

bioproject 1

  • PRJNA217180 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18218747 18218747 PRJNA217180_P_NODE_12555_length_167_cov_0.864407_g12455_i0 PRJNA217180 12555 167 0.864407 1.44355969 Hokovirus 1977636 Viruses Viruses 91.3 1.06e-19   NR ARF10588.1 1977638 g12455 i0 82 1.88622754491018 50 9 89.8 0 1 150 510 559 ARF10588.1 restriction-modification methylase [Hokovirus HKV1] diamond 315 92 0.992391304347826 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Hokovirus Hokovirus HKV1
27168579 27168579 PRJNA217180_P_NODE_13482_length_165_cov_0.879310_g13382_i0 PRJNA217180 13482 165 0.87931 1.4508615 Chrysochromulina ericina virus 455364 Viruses Viruses 82.8 1.01e-16   NR YP_009173653.1 455364 g13382 i0 70.9 1 55 16 100 0 1 165 564 618 YP_009173653.1 DNA-directed RNA polymerase II, subunit RpB1 [Chrysochromulina ericina virus] diamond 165 82.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae   Chrysochromulina ericina virus
31401394 31401394 PRJNA217180_P_NODE_10416_length_183_cov_1.522388_g10316_i0 PRJNA217180 10416 183 1.522388 2.78597004 Homavirus sp. 2487769 Viruses Viruses 60.5 9.47e-9   NR AYV82378.1 2487769 g10316 i0 49.2 1 61 29 98.4 2 1 180 308 367 AYV82378.1 MAG: hypothetical protein Homavirus40_3, partial [Homavirus sp.] diamond 183 60.5 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae   Homavirus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;