RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA207719" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA207719 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29144713 29144713 PRJNA207719_P_NODE_849_length_211_cov_1.554945_g829_i0 PRJNA207719 849 211 1.554945 3.28093395 Fungi 4751 Fungi Fungi 95.9 4.790000000000001e-21   NR KAG2202724.1 97098 g829 i0 67.1 26.8720379146919 70 23 99.5 0 1 210 358 427 KAG2202724.1 hypothetical protein INT46_003232 [Mucor plumbeus] diamond 5670 95.9 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor plumbeus
30628644 30628644 PRJNA207719_P_NODE_1353_length_150_cov_1.628099_g1333_i0 PRJNA207719 1353 150 1.628099 2.4421485 Rhizopus 4842 Fungi Fungi 64.7 1.48e-11   NR XP_067524313.1 246409 g1333 i0 62.5 9.66 48 18 96 0 146 3 33 80 XP_067524313.1 uncharacterized protein RO3G_13628 [Rhizopus delemar RA 99-880] diamond 1449 65.1 0.993855606758833 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus delemar
31608756 31608756 PRJNA207719_P_NODE_1296_length_155_cov_1.801587_g1276_i0 PRJNA207719 1296 155 1.801587 2.79245985 Fungi 4751 Fungi Fungi 71.2 9.81e-13   NR KAJ2962792.1 91625 g1276 i0 72.5 4.93548387096774 51 14 98.7 0 154 2 37 87 KAJ2962792.1 hypothetical protein NQZ79_g2063 [Umbelopsis isabellina] diamond 765 71.6 0.994413407821229 Eukaryota Opisthokonta Fungi Mucoromycota Umbelopsidomycetes Umbelopsidales Umbelopsidaceae Umbelopsis Umbelopsis isabellina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;