RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA207343" and tax_phylum = "Bacteroidota"

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tax_superkingdom 1

tax_phylum 1

  • Bacteroidota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA207343 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
366805 366805 PRJNA207343_S_NODE_1_length_19322_cov_37.551620_g0_i0 PRJNA207343 1 19322 37.55162 7255.7240164 Bacteroidaceae bacterium 2212467 Bacteria Bacteria 1576 0   NR MBO6253027.1 2212467 g0 i0 80.4 0.155884484007867 1004 156 15.3 6 16204 19155 1 983 MBO6253027.1 PriCT-2 domain-containing protein [Bacteroidaceae bacterium] diamond 3012 1576 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae   Bacteroidaceae bacterium
30737343 30737343 PRJNA207343_S_NODE_5594_length_280_cov_5.382716_g5057_i0 PRJNA207343 5594 280 5.382716 15.0716048 Paludibacteraceae bacterium 2748031 Bacteria Bacteria 49.7 1.29e-5   NR MBO5013845.1 2748031 g5057 i0 61.1 0.385714285714286 36 14 38.6 0 173 280 4 39 MBO5013845.1 hypothetical protein [Paludibacteraceae bacterium] diamond 108 49.7 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Paludibacteraceae   Paludibacteraceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;